RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
LINC02008-202ENST00000494340 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 NFKBIEO00221 500 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 SRGNP10124 158 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 RASSF7Q02833 373 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
LINC02008-202ENST00000494340 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
LINC02008-202ENST00000494340 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC02008-202ENST00000494340 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
LINC02008-202ENST00000494340 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
LINC02008-202ENST00000494340 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
LINC02008-202ENST00000494340 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
LINC02008-202ENST00000494340 NPHP1O15259 732 aa12.79□□□□□ -0.36
LINC02008-202ENST00000494340 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
LINC02008-202ENST00000494340 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
LINC02008-202ENST00000494340 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
LINC02008-202ENST00000494340 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
LINC02008-202ENST00000494340 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
LINC02008-202ENST00000494340 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
LINC02008-202ENST00000494340 WDR90Q96KV7 1748 aa12.77□□□□□ -0.36
LINC02008-202ENST00000494340 NUP98P52948 1817 aa12.77□□□□□ -0.37
LINC02008-202ENST00000494340 NPR1P16066 1061 aa12.77□□□□□ -0.37
LINC02008-202ENST00000494340 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
LINC02008-202ENST00000494340 PRELPP51888 382 aa12.77□□□□□ -0.37
LINC02008-202ENST00000494340 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
LINC02008-202ENST00000494340 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC02008-202ENST00000494340 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
LINC02008-202ENST00000494340 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
LINC02008-202ENST00000494340 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 C21orf2O43822 256 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
LINC02008-202ENST00000494340 NYXQ9GZU5 481 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 RRAGCQ9HB90 399 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
LINC02008-202ENST00000494340 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
LINC02008-202ENST00000494340 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
LINC02008-202ENST00000494340 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
LINC02008-202ENST00000494340 SMC1BQ8NDV3 1235 aa12.75□□□□□ -0.37
LINC02008-202ENST00000494340 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
LINC02008-202ENST00000494340 RIPK4P57078 832 aa12.74□□□□□ -0.37
LINC02008-202ENST00000494340 HLFQ16534 295 aa12.74□□□□□ -0.37
LINC02008-202ENST00000494340 CCDC93Q567U6 631 aa12.74□□□□□ -0.37
LINC02008-202ENST00000494340 KIF6Q6ZMV9 814 aa12.74□□□□□ -0.37
LINC02008-202ENST00000494340 TSPYL4Q9UJ04 414 aa12.74□□□□□ -0.37
LINC02008-202ENST00000494340 ALDH1B1P30837 517 aa12.73□□□□□ -0.37
LINC02008-202ENST00000494340 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
LINC02008-202ENST00000494340 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
LINC02008-202ENST00000494340 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
LINC02008-202ENST00000494340 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
LINC02008-202ENST00000494340 RTKN2Q8IZC4 609 aa12.72□□□□□ -0.37
LINC02008-202ENST00000494340 DNAJC5GQ8N7S2 189 aa12.72□□□□□ -0.37
LINC02008-202ENST00000494340 THUMPD2Q9BTF0 503 aaKnown RBP12.72□□□□□ -0.37
LINC02008-202ENST00000494340 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
LINC02008-202ENST00000494340 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
LINC02008-202ENST00000494340 FKBP4Q02790 459 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC02008-202ENST00000494340 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
LINC02008-202ENST00000494340 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
LINC02008-202ENST00000494340 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
LINC02008-202ENST00000494340 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
LINC02008-202ENST00000494340 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
LINC02008-202ENST00000494340 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.37
LINC02008-202ENST00000494340 SCN4AP35499 1836 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 POTECB2RU33 542 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 MYL6BP14649 208 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
LINC02008-202ENST00000494340 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
LINC02008-202ENST00000494340 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC02008-202ENST00000494340 PDIA6Q15084 440 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 NGEFQ8N5V2 710 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
LINC02008-202ENST00000494340 PSMD1Q99460 953 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
LINC02008-202ENST00000494340 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 CHL1O00533 1208 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 NTSR2O95665 410 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 HOXB7P09629 217 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
LINC02008-202ENST00000494340 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
LINC02008-202ENST00000494340 SUSD4Q5VX71 490 aa12.67□□□□□ -0.38
LINC02008-202ENST00000494340 CRAMP1Q96RY5 1269 aa12.67□□□□□ -0.38
LINC02008-202ENST00000494340 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms