RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TRIM32Q13049 653 aa11.54□□□□□ -0.56
RIF1-211ENST00000494333 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
RIF1-211ENST00000494333 KIF1AQ12756 1690 aa11.54□□□□□ -0.56
RIF1-211ENST00000494333 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
RIF1-211ENST00000494333 ADGRB2O60241 1585 aa11.54□□□□□ -0.56
RIF1-211ENST00000494333 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
RIF1-211ENST00000494333 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
RIF1-211ENST00000494333 UNC5CLQ8IV45 518 aa11.53□□□□□ -0.56
RIF1-211ENST00000494333 ARMC2Q8NEN0 867 aa11.53□□□□□ -0.56
RIF1-211ENST00000494333 FKBPLQ9UIM3 349 aa11.53□□□□□ -0.56
RIF1-211ENST00000494333 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
RIF1-211ENST00000494333 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
RIF1-211ENST00000494333 BCL9LQ86UU0 1499 aa11.52□□□□□ -0.56
RIF1-211ENST00000494333 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.56
RIF1-211ENST00000494333 RGPD8O14715 1765 aaPredicted RBP11.52□□□□□ -0.57
RIF1-211ENST00000494333 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.57
RIF1-211ENST00000494333 BAP1Q92560 729 aa11.52□□□□□ -0.57
RIF1-211ENST00000494333 TBC1D2BQ9UPU7 963 aa11.52□□□□□ -0.57
RIF1-211ENST00000494333 USP32Q8NFA0 1604 aa11.52□□□□□ -0.57
RIF1-211ENST00000494333 FAM83GA6ND36 823 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
RIF1-211ENST00000494333 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
RIF1-211ENST00000494333 ACEP12821 1306 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 RGS12O14924 1447 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 ATRNO75882 1429 aa11.51□□□□□ -0.57
RIF1-211ENST00000494333 GPR37L1O60883 481 aa11.5□□□□□ -0.57
RIF1-211ENST00000494333 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
RIF1-211ENST00000494333 PNMA1Q8ND90 353 aa11.5□□□□□ -0.57
RIF1-211ENST00000494333 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
RIF1-211ENST00000494333 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
RIF1-211ENST00000494333 ARHGEF28Q8N1W1 1705 aaKnown RBP11.49□□□□□ -0.57
RIF1-211ENST00000494333 NBPF14Q5TI25 921 aa11.49□□□□□ -0.57
RIF1-211ENST00000494333 ATP7BP35670 1465 aa11.49□□□□□ -0.57
RIF1-211ENST00000494333 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
RIF1-211ENST00000494333 SH3BP2P78314 561 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 ZNF511Q8NB15 262 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 CABP1Q9NZU7 370 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
RIF1-211ENST00000494333 ZC3H4Q9UPT8 1303 aaKnown RBP11.48□□□□□ -0.57
RIF1-211ENST00000494333 SLIT2O94813 1529 aa11.48□□□□□ -0.57
RIF1-211ENST00000494333 POLR3AO14802 1390 aaPredicted RBP11.47□□□□□ -0.57
RIF1-211ENST00000494333 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
RIF1-211ENST00000494333 SKOR1P84550 965 aa11.47□□□□□ -0.57
RIF1-211ENST00000494333 VPS72Q15906 364 aa11.47□□□□□ -0.57
RIF1-211ENST00000494333 ABTB2Q8N961 1025 aa11.47□□□□□ -0.57
RIF1-211ENST00000494333 GPKOWQ92917 476 aaPredicted RBP eCLIP11.47□□□□□ -0.571e-6■■■□□ 16.3
RIF1-211ENST00000494333 BTG4Q9NY30 223 aa11.47□□□□□ -0.57
RIF1-211ENST00000494333 EVC2Q86UK5 1308 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 RAD21O60216 631 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 RGS20O76081 388 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 ABL2P42684 1182 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 WNT7BP56706 349 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 PDXDC2PQ6P474 469 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 FOXJ1Q92949 421 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 CARD11Q9BXL7 1154 aa11.46□□□□□ -0.57
RIF1-211ENST00000494333 ZC3H6P61129 1189 aaKnown RBP11.45□□□□□ -0.58
RIF1-211ENST00000494333 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
RIF1-211ENST00000494333 PRDM11Q9NQV5 511 aa11.45□□□□□ -0.58
RIF1-211ENST00000494333 PPIP5K1Q6PFW1 1433 aa11.44□□□□□ -0.58
RIF1-211ENST00000494333 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
RIF1-211ENST00000494333 SH3BP5LQ7L8J4 393 aa11.44□□□□□ -0.58
RIF1-211ENST00000494333 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
RIF1-211ENST00000494333 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
RIF1-211ENST00000494333 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
RIF1-211ENST00000494333 IRF5Q13568 498 aa11.43□□□□□ -0.58
RIF1-211ENST00000494333 CHRNA2Q15822 529 aa11.43□□□□□ -0.58
RIF1-211ENST00000494333 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
RIF1-211ENST00000494333 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
RIF1-211ENST00000494333 MYT1Q01538 1121 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 AGERQ15109 404 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 MARF1Q9Y4F3 1742 aaKnown RBP11.42□□□□□ -0.58
RIF1-211ENST00000494333 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
RIF1-211ENST00000494333 KIAA0232Q92628 1395 aa11.41□□□□□ -0.58
RIF1-211ENST00000494333 ALS2Q96Q42 1657 aa11.41□□□□□ -0.58
RIF1-211ENST00000494333 PTK2Q05397 1052 aa11.41□□□□□ -0.58
RIF1-211ENST00000494333 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
RIF1-211ENST00000494333 RC3H1Q5TC82 1133 aaKnown RBP11.41□□□□□ -0.58
RIF1-211ENST00000494333 BPHLQ86WA6 291 aaPredicted RBP11.41□□□□□ -0.58
RIF1-211ENST00000494333 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
RIF1-211ENST00000494333 A6NJR5 290 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 GCP02774 474 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 EVA1CP58658 441 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 ARHGAP9Q9BRR9 750 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 ITSN1Q15811 1721 aa11.4□□□□□ -0.58
RIF1-211ENST00000494333 WNT7AO00755 349 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 FBXO45P0C2W1 286 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 GLI3P10071 1580 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 FOXC1Q12948 553 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 KRT27Q7Z3Y8 459 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms