RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 KLRG1Q96E93 195 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 MKNK1Q9BUB5 465 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
SSB-212ENST00000494051 CXXC1Q9P0U4 656 aaPredicted RBP10.53□□□□□ -0.72
SSB-212ENST00000494051 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSB-212ENST00000494051 PHF24Q9UPV7 400 aa10.52□□□□□ -0.73
SSB-212ENST00000494051 PCDHGC4Q9Y5F7 938 aa10.52□□□□□ -0.73
SSB-212ENST00000494051 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.73
SSB-212ENST00000494051 ATXN7O15265 892 aaPredicted RBP10.51□□□□□ -0.73
SSB-212ENST00000494051 KRT76Q01546 638 aa10.51□□□□□ -0.73
SSB-212ENST00000494051 GAS6Q14393 721 aa10.51□□□□□ -0.73
SSB-212ENST00000494051 ABHD17AQ96GS6 310 aa10.51□□□□□ -0.73
SSB-212ENST00000494051 BNIP3LO60238 219 aa10.5□□□□□ -0.73
SSB-212ENST00000494051 RTN1Q16799 776 aa10.5□□□□□ -0.73
SSB-212ENST00000494051 HSH2DQ96JZ2 352 aa10.5□□□□□ -0.73
SSB-212ENST00000494051 CFHR5Q9BXR6 569 aa10.5□□□□□ -0.73
SSB-212ENST00000494051 ANKIB1Q9P2G1 1089 aa10.5□□□□□ -0.73
SSB-212ENST00000494051 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
SSB-212ENST00000494051 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
SSB-212ENST00000494051 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
SSB-212ENST00000494051 SUSD3Q96L08 255 aa10.49□□□□□ -0.73
SSB-212ENST00000494051 QTRT2Q9H974 415 aaKnown RBP10.49□□□□□ -0.73
SSB-212ENST00000494051 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
SSB-212ENST00000494051 KHNYNO15037 678 aaKnown RBP10.48□□□□□ -0.73
SSB-212ENST00000494051 CAPN12Q6ZSI9 719 aa10.48□□□□□ -0.73
SSB-212ENST00000494051 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
SSB-212ENST00000494051 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
SSB-212ENST00000494051 ATXN7L1Q9ULK2 861 aaPredicted RBP10.48□□□□□ -0.73
SSB-212ENST00000494051 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
SSB-212ENST00000494051 MX2P20592 715 aa10.47□□□□□ -0.73
SSB-212ENST00000494051 DGKZQ13574 1117 aa10.47□□□□□ -0.73
SSB-212ENST00000494051 NAA30Q147X3 362 aaPredicted RBP10.47□□□□□ -0.73
SSB-212ENST00000494051 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
SSB-212ENST00000494051 TNP2Q05952 138 aa10.46□□□□□ -0.73
SSB-212ENST00000494051 HIF1AQ16665 826 aa10.46□□□□□ -0.73
SSB-212ENST00000494051 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
SSB-212ENST00000494051 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
SSB-212ENST00000494051 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
SSB-212ENST00000494051 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
SSB-212ENST00000494051 FGFR3P22607 806 aa10.45□□□□□ -0.74
SSB-212ENST00000494051 SSFA2P28290 1259 aa10.45□□□□□ -0.74
SSB-212ENST00000494051 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
SSB-212ENST00000494051 SCNN1AP37088 669 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 COX20Q5RI15 118 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 C16orf46Q6P387 395 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 COL26A1Q96A83 441 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 MYO19Q96H55 970 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 SAP130Q9H0E3 1048 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 LRFN2Q9ULH4 789 aa10.44□□□□□ -0.74
SSB-212ENST00000494051 NSFL1CQ9UNZ2 370 aaKnown RBP10.44□□□□□ -0.74
SSB-212ENST00000494051 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SSB-212ENST00000494051 CD33P20138 364 aa10.43□□□□□ -0.74
SSB-212ENST00000494051 CTBSQ01459 385 aa10.43□□□□□ -0.74
SSB-212ENST00000494051 SRSF11Q05519 484 aaKnown RBP10.43□□□□□ -0.74
SSB-212ENST00000494051 C11orf91Q3C1V1 193 aa10.43□□□□□ -0.74
SSB-212ENST00000494051 BCS1LQ9Y276 419 aa10.43□□□□□ -0.74
SSB-212ENST00000494051 IGF1RP08069 1367 aa10.42□□□□□ -0.74
SSB-212ENST00000494051 BMP4P12644 408 aa10.42□□□□□ -0.74
SSB-212ENST00000494051 BTLAQ7Z6A9 289 aa10.42□□□□□ -0.74
SSB-212ENST00000494051 SEPT3Q9UH03 358 aa10.42□□□□□ -0.74
SSB-212ENST00000494051 HCN2Q9UL51 889 aa10.42□□□□□ -0.74
SSB-212ENST00000494051 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 EFSO43281 561 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 PDE4CQ08493 712 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 IFT43Q96FT9 208 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 BRD7Q9NPI1 651 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
SSB-212ENST00000494051 TYRO3Q06418 890 aa10.4□□□□□ -0.74
SSB-212ENST00000494051 SFSWAPQ12872 951 aaKnown RBP10.4□□□□□ -0.74
SSB-212ENST00000494051 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
SSB-212ENST00000494051 MAP2K3P46734 347 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 LAMC2Q13753 1193 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 IER5Q5VY09 327 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 PHLDB3Q6NSJ2 640 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 ZSCAN1Q8NBB4 408 aa10.39□□□□□ -0.75
SSB-212ENST00000494051 C2CD2LO14523 706 aa10.38□□□□□ -0.75
SSB-212ENST00000494051 MICAL2O94851 1124 aa10.38□□□□□ -0.75
SSB-212ENST00000494051 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
SSB-212ENST00000494051 DMGDHQ9UI17 866 aaKnown RBP10.38□□□□□ -0.75
SSB-212ENST00000494051 IDH3AP50213 366 aa10.37□□□□□ -0.75
SSB-212ENST00000494051 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
SSB-212ENST00000494051 BRD2P25440 801 aaKnown RBP10.36□□□□□ -0.75
SSB-212ENST00000494051 FAM182BQ5T319 152 aa10.36□□□□□ -0.75
SSB-212ENST00000494051 TREML1Q86YW5 311 aa10.36□□□□□ -0.75
SSB-212ENST00000494051 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
SSB-212ENST00000494051 PRR12Q9ULL5 1215 aa10.36□□□□□ -0.75
SSB-212ENST00000494051 KCNH4Q9UQ05 1017 aa10.36□□□□□ -0.75
SSB-212ENST00000494051 TNFRSF10BO14763 440 aa10.35□□□□□ -0.75
SSB-212ENST00000494051 GTF3C2Q8WUA4 911 aaPredicted RBP10.35□□□□□ -0.75
SSB-212ENST00000494051 ACDQ96AP0 544 aa10.35□□□□□ -0.75
SSB-212ENST00000494051 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
SSB-212ENST00000494051 MTMR7Q9Y216 660 aa10.35□□□□□ -0.75
SSB-212ENST00000494051 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
SSB-212ENST00000494051 INPP5BP32019 993 aa10.34□□□□□ -0.75
SSB-212ENST00000494051 ETFBKMTQ8IXQ9 262 aa10.34□□□□□ -0.75
SSB-212ENST00000494051 SVOPQ8N4V2 548 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms