RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 CDK11BP21127 795 aaKnown RBP16.51■□□□□ 0.23
TFE3-204ENST00000493583 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
TFE3-204ENST00000493583 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 F13A1P00488 732 aa16.51■□□□□ 0.23
TFE3-204ENST00000493583 SMAP1Q8IYB5 467 aaPredicted RBP16.51■□□□□ 0.23
TFE3-204ENST00000493583 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 ZBTB22O15209 634 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 PHF14O94880 888 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
TFE3-204ENST00000493583 CCDC94Q9BW85 323 aaPredicted RBP16.5■□□□□ 0.23
TFE3-204ENST00000493583 ME3Q16798 604 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
TFE3-204ENST00000493583 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
TFE3-204ENST00000493583 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 PTPRCP08575 1304 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 DACT1Q9NYF0 836 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
TFE3-204ENST00000493583 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 HSPA4P34932 840 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 GNAI3P08754 354 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
TFE3-204ENST00000493583 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
TFE3-204ENST00000493583 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
TFE3-204ENST00000493583 FILIP1Q7Z7B0 1213 aa16.47■□□□□ 0.23
TFE3-204ENST00000493583 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
TFE3-204ENST00000493583 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
TFE3-204ENST00000493583 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
TFE3-204ENST00000493583 BICD2Q8TD16 824 aa16.47■□□□□ 0.23
TFE3-204ENST00000493583 SGSM2O43147 1006 aa16.46■□□□□ 0.23
TFE3-204ENST00000493583 UBE2HP62256 183 aa16.46■□□□□ 0.23
TFE3-204ENST00000493583 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
TFE3-204ENST00000493583 CGNQ9P2M7 1197 aaKnown RBP16.46■□□□□ 0.23
TFE3-204ENST00000493583 A0A0G2JS52 829 aa16.46■□□□□ 0.23
TFE3-204ENST00000493583 JAK2O60674 1132 aa16.46■□□□□ 0.22
TFE3-204ENST00000493583 RAB11FIP3O75154 756 aa16.46■□□□□ 0.22
TFE3-204ENST00000493583 MCM2P49736 904 aa16.46■□□□□ 0.22
TFE3-204ENST00000493583 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.22
TFE3-204ENST00000493583 MTMR6Q9Y217 621 aa16.46■□□□□ 0.22
TFE3-204ENST00000493583 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
TFE3-204ENST00000493583 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
TFE3-204ENST00000493583 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
TFE3-204ENST00000493583 HOXC9P31274 260 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
TFE3-204ENST00000493583 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
TFE3-204ENST00000493583 AACSQ86V21 672 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 C9orf78Q9NZ63 289 aaPredicted RBP16.44■□□□□ 0.22
TFE3-204ENST00000493583 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
TFE3-204ENST00000493583 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
TFE3-204ENST00000493583 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
TFE3-204ENST00000493583 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 MCM5P33992 734 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 ZNF771Q7L3S4 317 aaPredicted RBP16.43■□□□□ 0.22
TFE3-204ENST00000493583 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 INTS4Q96HW7 963 aaKnown RBP16.43■□□□□ 0.22
TFE3-204ENST00000493583 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 ERICH4A6NGS2 130 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
TFE3-204ENST00000493583 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
TFE3-204ENST00000493583 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
TFE3-204ENST00000493583 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
TFE3-204ENST00000493583 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
TFE3-204ENST00000493583 USP27XA6NNY8 438 aa16.42■□□□□ 0.22
TFE3-204ENST00000493583 NR1I2O75469 434 aa16.42■□□□□ 0.22
TFE3-204ENST00000493583 CSB-PGBD3P0DP91 1061 aa16.42■□□□□ 0.22
TFE3-204ENST00000493583 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms