RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 GNAI1P63096 354 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 PRR5LQ6MZQ0 368 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 CLEC4GQ6UXB4 293 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
SGIP1-213ENST00000493564 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SGIP1-213ENST00000493564 GPTP24298 496 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.45
SGIP1-213ENST00000493564 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 NBPF5PQ86XG9 351 aaPredicted RBP12.27□□□□□ -0.45
SGIP1-213ENST00000493564 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 CHPF2Q9P2E5 772 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 CARMIL3Q8ND23 1372 aa12.27□□□□□ -0.45
SGIP1-213ENST00000493564 ARHGAP27Q6ZUM4 889 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 LRP10Q7Z4F1 713 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 XAGE3Q8WTP9 111 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
SGIP1-213ENST00000493564 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
SGIP1-213ENST00000493564 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
SGIP1-213ENST00000493564 H0YIN7 160 aa12.25□□□□□ -0.45
SGIP1-213ENST00000493564 CCDC27Q2M243 656 aa12.25□□□□□ -0.45
SGIP1-213ENST00000493564 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
SGIP1-213ENST00000493564 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
SGIP1-213ENST00000493564 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.45
SGIP1-213ENST00000493564 DDX21Q9NR30 783 aaKnown RBP eCLIP12.25□□□□□ -0.45
SGIP1-213ENST00000493564 ERBB4Q15303 1308 aa12.25□□□□□ -0.45
SGIP1-213ENST00000493564 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 TCERG1O14776 1098 aaKnown RBP12.24□□□□□ -0.45
SGIP1-213ENST00000493564 GTF2E1P29083 439 aaPredicted RBP12.24□□□□□ -0.45
SGIP1-213ENST00000493564 ST5P78524 1137 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 KIF13BQ9NQT8 1826 aa12.24□□□□□ -0.45
SGIP1-213ENST00000493564 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
SGIP1-213ENST00000493564 PDE6BP35913 854 aa12.23□□□□□ -0.45
SGIP1-213ENST00000493564 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
SGIP1-213ENST00000493564 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
SGIP1-213ENST00000493564 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
SGIP1-213ENST00000493564 HOXB7P09629 217 aa12.22□□□□□ -0.45
SGIP1-213ENST00000493564 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
SGIP1-213ENST00000493564 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
SGIP1-213ENST00000493564 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
SGIP1-213ENST00000493564 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
SGIP1-213ENST00000493564 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
SGIP1-213ENST00000493564 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
SGIP1-213ENST00000493564 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
SGIP1-213ENST00000493564 UBN2Q6ZU65 1347 aa12.21□□□□□ -0.45
SGIP1-213ENST00000493564 NRXN2Q9P2S2 1712 aa12.21□□□□□ -0.45
SGIP1-213ENST00000493564 TTLL6Q8N841 843 aa12.21□□□□□ -0.45
SGIP1-213ENST00000493564 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
SGIP1-213ENST00000493564 CHD4Q14839 1912 aa12.2□□□□□ -0.46
SGIP1-213ENST00000493564 RGL2O15211 777 aa12.2□□□□□ -0.46
SGIP1-213ENST00000493564 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
SGIP1-213ENST00000493564 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
SGIP1-213ENST00000493564 WDR63Q8IWG1 891 aa12.2□□□□□ -0.46
SGIP1-213ENST00000493564 HYPKQ9NX55 129 aa12.2□□□□□ -0.46
SGIP1-213ENST00000493564 C21orf2O43822 256 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 SRGNP10124 158 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
SGIP1-213ENST00000493564 MIER1Q8N108 512 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
SGIP1-213ENST00000493564 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
SGIP1-213ENST00000493564 NUP98P52948 1817 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 IL16Q14005 1332 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 ATP5J2-PTCD1G3V325 749 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
SGIP1-213ENST00000493564 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
SGIP1-213ENST00000493564 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
SGIP1-213ENST00000493564 ANKRD31Q8N7Z5 1873 aa12.18□□□□□ -0.46
SGIP1-213ENST00000493564 NTSR2O95665 410 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 RASSF7Q02833 373 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
SGIP1-213ENST00000493564 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 PLBD2Q8NHP8 589 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 ATP10DQ9P241 1426 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
SGIP1-213ENST00000493564 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
SGIP1-213ENST00000493564 VAMP4O75379 141 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms