RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
CAB39-206ENST00000493540 RAPGEF4Q8WZA2 1011 aa9.81□□□□□ -0.84
CAB39-206ENST00000493540 EMILIN1Q9Y6C2 1016 aa9.81□□□□□ -0.84
CAB39-206ENST00000493540 COL11A2P13942 1736 aaPredicted RBP9.81□□□□□ -0.84
CAB39-206ENST00000493540 CACNA1SQ13698 1873 aa9.81□□□□□ -0.84
CAB39-206ENST00000493540 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
CAB39-206ENST00000493540 IGSF1Q8N6C5 1336 aa9.81□□□□□ -0.84
CAB39-206ENST00000493540 TATP17735 454 aaPredicted RBP9.8□□□□□ -0.84
CAB39-206ENST00000493540 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
CAB39-206ENST00000493540 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
CAB39-206ENST00000493540 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
CAB39-206ENST00000493540 FLAD1Q8NFF5 587 aa9.8□□□□□ -0.84
CAB39-206ENST00000493540 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
CAB39-206ENST00000493540 SSFA2P28290 1259 aa9.79□□□□□ -0.84
CAB39-206ENST00000493540 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
CAB39-206ENST00000493540 PIGBQ92521 554 aa9.79□□□□□ -0.84
CAB39-206ENST00000493540 SYTL4Q96C24 671 aaPredicted RBP9.79□□□□□ -0.84
CAB39-206ENST00000493540 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
CAB39-206ENST00000493540 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
CAB39-206ENST00000493540 KCPQ6ZWJ8 1503 aa9.78□□□□□ -0.84
CAB39-206ENST00000493540 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
CAB39-206ENST00000493540 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
CAB39-206ENST00000493540 GPR162Q16538 588 aa9.78□□□□□ -0.84
CAB39-206ENST00000493540 LINC00116Q8NCU8 138 aa9.78□□□□□ -0.84
CAB39-206ENST00000493540 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
CAB39-206ENST00000493540 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
CAB39-206ENST00000493540 EYA1Q99502 592 aa9.77□□□□□ -0.85
CAB39-206ENST00000493540 POLKQ9UBT6 870 aa9.77□□□□□ -0.85
CAB39-206ENST00000493540 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 LOC102724428A0A0B4J2F2 783 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 NUDT7P0C024 238 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 PHKG2P15735 406 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 SIK1P57059 783 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 ITPK1Q13572 414 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 DDX12PQ92771 950 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
CAB39-206ENST00000493540 CNTNAP4Q9C0A0 1308 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 DLG5Q8TDM6 1919 aa9.76□□□□□ -0.85
CAB39-206ENST00000493540 COL3A1P02461 1466 aaPredicted RBP9.75□□□□□ -0.85
CAB39-206ENST00000493540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
CAB39-206ENST00000493540 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
CAB39-206ENST00000493540 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
CAB39-206ENST00000493540 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
CAB39-206ENST00000493540 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
CAB39-206ENST00000493540 EIF4A2Q14240 407 aaKnown RBP9.74□□□□□ -0.85
CAB39-206ENST00000493540 MPRIPQ6WCQ1 1025 aa9.74□□□□□ -0.85
CAB39-206ENST00000493540 ASAP1Q9ULH1 1129 aa9.74□□□□□ -0.85
CAB39-206ENST00000493540 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
CAB39-206ENST00000493540 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
CAB39-206ENST00000493540 IFNL2Q8IZJ0 200 aa9.73□□□□□ -0.85
CAB39-206ENST00000493540 AK7Q96M32 723 aa9.73□□□□□ -0.85
CAB39-206ENST00000493540 ATG3Q9NT62 314 aa9.73□□□□□ -0.85
CAB39-206ENST00000493540 PHF14O94880 888 aa9.72□□□□□ -0.85
CAB39-206ENST00000493540 OSBPP22059 807 aa9.72□□□□□ -0.85
CAB39-206ENST00000493540 EPAS1Q99814 870 aa9.72□□□□□ -0.85
CAB39-206ENST00000493540 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
CAB39-206ENST00000493540 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
CAB39-206ENST00000493540 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
CAB39-206ENST00000493540 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
CAB39-206ENST00000493540 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
CAB39-206ENST00000493540 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
CAB39-206ENST00000493540 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
CAB39-206ENST00000493540 GNPATO15228 680 aa9.69□□□□□ -0.86
CAB39-206ENST00000493540 GYS1P13807 737 aa9.69□□□□□ -0.86
CAB39-206ENST00000493540 HSPA6P17066 643 aa9.69□□□□□ -0.86
CAB39-206ENST00000493540 TRIM26Q12899 539 aaPredicted RBP9.69□□□□□ -0.86
CAB39-206ENST00000493540 LHX6Q9UPM6 363 aa9.69□□□□□ -0.86
CAB39-206ENST00000493540 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
CAB39-206ENST00000493540 SCN4AP35499 1836 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 NUP98P52948 1817 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 ADAMTSL1Q8N6G6 1762 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 MMP10P09238 476 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
CAB39-206ENST00000493540 KCNA3P22001 575 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 FOSBP53539 338 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 EMP3P54852 163 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 TGFB2P61812 414 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
CAB39-206ENST00000493540 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
CAB39-206ENST00000493540 USP42Q9H9J4 1324 aaKnown RBP9.67□□□□□ -0.86
CAB39-206ENST00000493540 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
CAB39-206ENST00000493540 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
CAB39-206ENST00000493540 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
CAB39-206ENST00000493540 AMOTQ4VCS5 1084 aa9.66□□□□□ -0.86
CAB39-206ENST00000493540 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
CAB39-206ENST00000493540 NLGN1Q8N2Q7 840 aa9.66□□□□□ -0.86
CAB39-206ENST00000493540 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
CAB39-206ENST00000493540 NPC1L1Q9UHC9 1359 aa9.65□□□□□ -0.86
CAB39-206ENST00000493540 IL13P35225 146 aa9.65□□□□□ -0.86
CAB39-206ENST00000493540 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
CAB39-206ENST00000493540 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.86
CAB39-206ENST00000493540 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.86
CAB39-206ENST00000493540 RTCBQ9Y3I0 505 aaKnown RBP9.65□□□□□ -0.86
CAB39-206ENST00000493540 SOS1Q07889 1333 aaPredicted RBP9.64□□□□□ -0.87
CAB39-206ENST00000493540 DDR1Q08345 913 aa9.64□□□□□ -0.87
CAB39-206ENST00000493540 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
CAB39-206ENST00000493540 ANKRD36CQ5JPF3 1778 aa9.64□□□□□ -0.87
CAB39-206ENST00000493540 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms