RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 BAG3O95817 575 aa18.89■□□□□ 0.61
BRAT1-206ENST00000493232 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.61
BRAT1-206ENST00000493232 CCDC102AQ96A19 550 aa18.89■□□□□ 0.61
BRAT1-206ENST00000493232 ZBTB3Q9H5J0 574 aa18.89■□□□□ 0.61
BRAT1-206ENST00000493232 HMG20BQ9P0W2 317 aa18.89■□□□□ 0.61
BRAT1-206ENST00000493232 PTPN14Q15678 1187 aa18.89■□□□□ 0.61
BRAT1-206ENST00000493232 CCDC150Q8NCX0 1101 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 CNNM3Q8NE01 707 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 MCM3P25205 808 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 AMPD3Q01432 767 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 PDE4BQ07343 736 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 CRACR2AQ9BSW2 395 aa18.88■□□□□ 0.61
BRAT1-206ENST00000493232 FBXO31Q5XUX0 539 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-206ENST00000493232 MAP9Q49MG5 647 aa18.87■□□□□ 0.61
BRAT1-206ENST00000493232 DDX46Q7L014 1031 aaKnown RBP18.87■□□□□ 0.61
BRAT1-206ENST00000493232 USO1O60763 962 aaKnown RBP18.87■□□□□ 0.61
BRAT1-206ENST00000493232 UQCRFS1P1P0C7P4 283 aa18.87■□□□□ 0.61
BRAT1-206ENST00000493232 GPTP24298 496 aa18.87■□□□□ 0.61
BRAT1-206ENST00000493232 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
BRAT1-206ENST00000493232 C6orf229H3BNL8 230 aa18.87■□□□□ 0.61
BRAT1-206ENST00000493232 SNRPA1P09661 255 aaKnown RBP18.87■□□□□ 0.61
BRAT1-206ENST00000493232 IARSP41252 1262 aaKnown RBP18.86■□□□□ 0.61
BRAT1-206ENST00000493232 CETN1Q12798 172 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 CALML4Q96GE6 196 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 TCP11L1Q9NUJ3 509 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 NEMFO60524 1076 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 YEATS4O95619 227 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 GOLIM4O00461 696 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 GUCY1B3Q02153 619 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 TMCO3Q6UWJ1 677 aa18.86■□□□□ 0.61
BRAT1-206ENST00000493232 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 CCDC82Q8N4S0 544 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 KIF18AQ8NI77 898 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 TMEM67Q5HYA8 995 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 STXBP4Q6ZWJ1 553 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 FSIP1Q8NA03 581 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
BRAT1-206ENST00000493232 HLA-DOAP06340 250 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 CCDC91Q7Z6B0 441 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
BRAT1-206ENST00000493232 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 CASQ1P31415 396 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 KAT14Q9H8E8 782 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 USP8P40818 1118 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 GSTO1P78417 241 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 LRRC27Q9C0I9 530 aa18.84■□□□□ 0.61
BRAT1-206ENST00000493232 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.61
BRAT1-206ENST00000493232 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.61
BRAT1-206ENST00000493232 MBIPQ9NS73 344 aa18.83■□□□□ 0.61
BRAT1-206ENST00000493232 CLIP2Q9UDT6 1046 aa18.83■□□□□ 0.61
BRAT1-206ENST00000493232 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
BRAT1-206ENST00000493232 FAM114A1Q8IWE2 563 aa18.83■□□□□ 0.6
BRAT1-206ENST00000493232 PAFAH1B1P43034 410 aa18.83■□□□□ 0.6
BRAT1-206ENST00000493232 GSDMDP57764 484 aa18.83■□□□□ 0.6
BRAT1-206ENST00000493232 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.6
BRAT1-206ENST00000493232 UBE3BQ7Z3V4 1068 aa18.83■□□□□ 0.6
BRAT1-206ENST00000493232 FANCAO15360 1455 aa18.83■□□□□ 0.6
BRAT1-206ENST00000493232 TSPY2A6NKD2 308 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 ANAPC15P60006 121 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 NEK1Q96PY6 1258 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
BRAT1-206ENST00000493232 FEZ1Q99689 392 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 ACEP12821 1306 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 PI4KAP2A4QPH2 592 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 STX1AQ16623 288 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 PI4KAP1Q8N8J0 262 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 TTLL12Q14166 644 aaPredicted RBP18.82■□□□□ 0.6
BRAT1-206ENST00000493232 CCDC178Q5BJE1 867 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
BRAT1-206ENST00000493232 CAVIN2O95810 425 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 GJB2P29033 226 aa18.82■□□□□ 0.6
BRAT1-206ENST00000493232 STX6O43752 255 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 ZFYP08048 801 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 METAP2P50579 478 aaKnown RBP eCLIP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 CCDC152Q4G0S7 254 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 TDRD12Q587J7 1177 aaKnown RBP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
BRAT1-206ENST00000493232 SSFA2P28290 1259 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 TBC1D9Q6ZT07 1266 aa18.81■□□□□ 0.6
BRAT1-206ENST00000493232 C11orf95C9JLR9 678 aaPredicted RBP18.8■□□□□ 0.6
BRAT1-206ENST00000493232 WDR78Q5VTH9 848 aa18.8■□□□□ 0.6
BRAT1-206ENST00000493232 IBSPP21815 317 aaPredicted RBP18.8■□□□□ 0.6
BRAT1-206ENST00000493232 TRAF1Q13077 416 aa18.8■□□□□ 0.6
BRAT1-206ENST00000493232 TAF3Q5VWG9 929 aa18.8■□□□□ 0.6
BRAT1-206ENST00000493232 ATP5J2-PTCD1G3V325 749 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms