RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 POLRMTO00411 1230 aaKnown RBP16.52■□□□□ 0.24
CLIP2-209ENST00000493166 PDIA6Q15084 440 aa16.52■□□□□ 0.24
CLIP2-209ENST00000493166 TBC1D9BQ66K14 1250 aa16.52■□□□□ 0.24
CLIP2-209ENST00000493166 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
CLIP2-209ENST00000493166 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-209ENST00000493166 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.23
CLIP2-209ENST00000493166 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 ANKRD31Q8N7Z5 1873 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 TTLL7Q6ZT98 887 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 TSPYL6Q8N831 410 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 NLGN2Q8NFZ4 835 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 CHMP4AQ9BY43 222 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
CLIP2-209ENST00000493166 ERVV-1B6SEH8 477 aa16.5■□□□□ 0.23
CLIP2-209ENST00000493166 RGL2O15211 777 aa16.5■□□□□ 0.23
CLIP2-209ENST00000493166 TWISTNBQ3B726 338 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-209ENST00000493166 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
CLIP2-209ENST00000493166 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
CLIP2-209ENST00000493166 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-209ENST00000493166 DLEC1Q9Y238 1755 aa16.5■□□□□ 0.23
CLIP2-209ENST00000493166 SERPINB2P05120 415 aa16.49■□□□□ 0.23
CLIP2-209ENST00000493166 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
CLIP2-209ENST00000493166 HLFQ16534 295 aa16.49■□□□□ 0.23
CLIP2-209ENST00000493166 CCDC30Q5VVM6 783 aa16.49■□□□□ 0.23
CLIP2-209ENST00000493166 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
CLIP2-209ENST00000493166 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
CLIP2-209ENST00000493166 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CLIP2-209ENST00000493166 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
CLIP2-209ENST00000493166 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
CLIP2-209ENST00000493166 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
CLIP2-209ENST00000493166 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
CLIP2-209ENST00000493166 NPHP1O15259 732 aa16.47■□□□□ 0.23
CLIP2-209ENST00000493166 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLIP2-209ENST00000493166 PXDNLA1KZ92 1463 aa16.47■□□□□ 0.23
CLIP2-209ENST00000493166 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.23
CLIP2-209ENST00000493166 E9PSI1 815 aa16.46■□□□□ 0.23
CLIP2-209ENST00000493166 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
CLIP2-209ENST00000493166 TGFB2P61812 414 aa16.45■□□□□ 0.22
CLIP2-209ENST00000493166 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
CLIP2-209ENST00000493166 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
CLIP2-209ENST00000493166 CHD4Q14839 1912 aa16.45■□□□□ 0.22
CLIP2-209ENST00000493166 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
CLIP2-209ENST00000493166 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLIP2-209ENST00000493166 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
CLIP2-209ENST00000493166 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
CLIP2-209ENST00000493166 UTRNP46939 3433 aa16.44■□□□□ 0.22
CLIP2-209ENST00000493166 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
CLIP2-209ENST00000493166 VAMP4O75379 141 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 GPTP24298 496 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 ST5P78524 1137 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 PRR5LQ6MZQ0 368 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 ANKRD13DQ6ZTN6 518 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
CLIP2-209ENST00000493166 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
CLIP2-209ENST00000493166 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
CLIP2-209ENST00000493166 GPR162Q16538 588 aa16.42■□□□□ 0.22
CLIP2-209ENST00000493166 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
CLIP2-209ENST00000493166 TNRC6CQ9HCJ0 1690 aaKnown RBP16.42■□□□□ 0.22
CLIP2-209ENST00000493166 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
CLIP2-209ENST00000493166 DPEP1P16444 411 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 LAMB2P55268 1798 aa16.41■□□□□ 0.22
CLIP2-209ENST00000493166 IBTKQ9P2D0 1353 aaPredicted RBP16.4■□□□□ 0.22
CLIP2-209ENST00000493166 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
CLIP2-209ENST00000493166 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
CLIP2-209ENST00000493166 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
CLIP2-209ENST00000493166 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
CLIP2-209ENST00000493166 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
CLIP2-209ENST00000493166 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
CLIP2-209ENST00000493166 BRIP1Q9BX63 1249 aa16.4■□□□□ 0.22
CLIP2-209ENST00000493166 CHRNA5P30532 468 aa16.39■□□□□ 0.21
CLIP2-209ENST00000493166 PDE6BP35913 854 aa16.39■□□□□ 0.21
CLIP2-209ENST00000493166 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
CLIP2-209ENST00000493166 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
CLIP2-209ENST00000493166 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
CLIP2-209ENST00000493166 DDX60Q8IY21 1712 aaKnown RBP16.38■□□□□ 0.21
CLIP2-209ENST00000493166 H0YIN7 160 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLIP2-209ENST00000493166 KCNA3P22001 575 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 G2E3Q7L622 706 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 NUTM1Q86Y26 1132 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
CLIP2-209ENST00000493166 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
CLIP2-209ENST00000493166 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
CLIP2-209ENST00000493166 NTSR2O95665 410 aa16.36■□□□□ 0.21
CLIP2-209ENST00000493166 FLIIQ13045 1269 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms