RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TRIM50Q86XT4 487 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
TPR-208ENST00000492973 KIDINS220Q9ULH0 1771 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 WASLO00401 505 aaPredicted RBP10.31□□□□□ -0.76
TPR-208ENST00000492973 GPC1P35052 558 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 ITGAEP38570 1179 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 CLDN10P78369 228 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 CNKSR1Q969H4 720 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 DNMT1P26358 1616 aaKnown RBP10.31□□□□□ -0.76
TPR-208ENST00000492973 ABCA6Q8N139 1617 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
TPR-208ENST00000492973 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
TPR-208ENST00000492973 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 MAN1A2O60476 641 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 GDF10P55107 478 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 A2MP01023 1474 aa10.3□□□□□ -0.76
TPR-208ENST00000492973 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
TPR-208ENST00000492973 INHAP05111 366 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 CCDC97Q96F63 343 aaPredicted RBP10.29□□□□□ -0.76
TPR-208ENST00000492973 NLRP3Q96P20 1036 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 KIAA1024Q9UPX6 916 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 NCOA1Q15788 1441 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 ADGRL2O95490 1459 aa10.29□□□□□ -0.76
TPR-208ENST00000492973 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 KIF15Q9NS87 1388 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.28□□□□□ -0.765e-6■■■□□ 17.1
TPR-208ENST00000492973 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 FHDC1Q9C0D6 1143 aaPredicted RBP10.28□□□□□ -0.76
TPR-208ENST00000492973 GRIP2Q9C0E4 1043 aa10.28□□□□□ -0.76
TPR-208ENST00000492973 ARID4BQ4LE39 1312 aaPredicted RBP10.28□□□□□ -0.76
TPR-208ENST00000492973 ROCK1Q13464 1354 aa10.27□□□□□ -0.76
TPR-208ENST00000492973 REREQ9P2R6 1566 aa10.27□□□□□ -0.76
TPR-208ENST00000492973 CENPCQ03188 943 aa10.27□□□□□ -0.77
TPR-208ENST00000492973 LARGE2Q8N3Y3 721 aa10.27□□□□□ -0.77
TPR-208ENST00000492973 DNAAF2Q9NVR5 837 aaKnown RBP10.27□□□□□ -0.77
TPR-208ENST00000492973 AGLP35573 1532 aa10.27□□□□□ -0.77
TPR-208ENST00000492973 SIGLEC1Q9BZZ2 1709 aa10.27□□□□□ -0.77
TPR-208ENST00000492973 DKK1O94907 266 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
TPR-208ENST00000492973 PSME1Q06323 249 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 MLECQ14165 292 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 SIX5Q8N196 739 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
TPR-208ENST00000492973 CROCC2H7BZ55 1655 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 RASA1P20936 1047 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 TPCN2Q8NHX9 752 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
TPR-208ENST00000492973 KIF3BO15066 747 aa10.24□□□□□ -0.77
TPR-208ENST00000492973 RFX1P22670 979 aa10.24□□□□□ -0.77
TPR-208ENST00000492973 PTK7Q13308 1070 aa10.24□□□□□ -0.77
TPR-208ENST00000492973 CRTC2Q53ET0 693 aaPredicted RBP10.24□□□□□ -0.77
TPR-208ENST00000492973 ZNF358Q9NW07 568 aa10.24□□□□□ -0.77
TPR-208ENST00000492973 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
TPR-208ENST00000492973 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
TPR-208ENST00000492973 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
TPR-208ENST00000492973 TLR1Q15399 786 aa10.23□□□□□ -0.77
TPR-208ENST00000492973 SLC27A3Q5K4L6 730 aa10.23□□□□□ -0.77
TPR-208ENST00000492973 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPR-208ENST00000492973 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
TPR-208ENST00000492973 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L12C9JPN9 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L21D6R901 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 SMTNP53814 917 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 MTFR1Q15390 333 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 GGT6Q6P531 493 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
TPR-208ENST00000492973 PRICKLE2Q7Z3G6 844 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 ZSCAN10Q96SZ4 725 aaPredicted RBP10.22□□□□□ -0.77
TPR-208ENST00000492973 SERTAD1Q9UHV2 236 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 NAIPQ13075 1403 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 ERBINQ96RT1 1412 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 ADGBQ8N7X0 1667 aa10.22□□□□□ -0.77
TPR-208ENST00000492973 PTSQ03393 145 aa10.21□□□□□ -0.77
TPR-208ENST00000492973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.2□□□□□ -0.78
TPR-208ENST00000492973 SENP3-EIF4A1A0A087X0R7 540 aa10.2□□□□□ -0.78
TPR-208ENST00000492973 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
TPR-208ENST00000492973 M0R2N6 131 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms