RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 CHL1O00533 1208 aa35.46■■■■□ 3.27
SH3GL3-204ENST00000492099 TTLL6Q8N841 843 aa35.46■■■■□ 3.27
SH3GL3-204ENST00000492099 ERVV-1B6SEH8 477 aa35.45■■■■□ 3.27
SH3GL3-204ENST00000492099 NBPF5PQ86XG9 351 aaPredicted RBP35.45■■■■□ 3.27
SH3GL3-204ENST00000492099 NIP7Q9Y221 180 aaKnown RBP eCLIP35.45■■■■□ 3.27
SH3GL3-204ENST00000492099 MYL6BP14649 208 aa35.44■■■■□ 3.26
SH3GL3-204ENST00000492099 CCDC24Q8N4L8 307 aa35.44■■■■□ 3.26
SH3GL3-204ENST00000492099 HLFQ16534 295 aa35.43■■■■□ 3.26
SH3GL3-204ENST00000492099 KIF6Q6ZMV9 814 aa35.43■■■■□ 3.26
SH3GL3-204ENST00000492099 LAS1LQ9Y4W2 734 aaKnown RBP35.43■■■■□ 3.26
SH3GL3-204ENST00000492099 EIF2S2P20042 333 aaKnown RBP35.42■■■■□ 3.26
SH3GL3-204ENST00000492099 GPBP1L1Q9HC44 474 aaPredicted RBP35.42■■■■□ 3.26
SH3GL3-204ENST00000492099 MAP3K15Q6ZN16 1313 aa35.41■■■■□ 3.26
SH3GL3-204ENST00000492099 APAF1O14727 1248 aa35.41■■■■□ 3.26
SH3GL3-204ENST00000492099 TPTE2Q6XPS3 522 aa35.41■■■■□ 3.26
SH3GL3-204ENST00000492099 DLEC1Q9Y238 1755 aa35.4■■■■□ 3.26
SH3GL3-204ENST00000492099 TTLL7Q6ZT98 887 aa35.39■■■■□ 3.26
SH3GL3-204ENST00000492099 ZNF622Q969S3 477 aaKnown RBP eCLIP35.39■■■■□ 3.26
SH3GL3-204ENST00000492099 ANKRD31Q8N7Z5 1873 aa35.38■■■■□ 3.25
SH3GL3-204ENST00000492099 ANP32CO43423 234 aa35.38■■■■□ 3.25
SH3GL3-204ENST00000492099 CFAP44Q96MT7 982 aa35.38■■■■□ 3.25
SH3GL3-204ENST00000492099 PDIA6Q15084 440 aa35.36■■■■□ 3.25
SH3GL3-204ENST00000492099 C9orf131Q5VYM1 1079 aa35.36■■■■□ 3.25
SH3GL3-204ENST00000492099 ZNF526Q8TF50 670 aaPredicted RBP35.36■■■■□ 3.25
SH3GL3-204ENST00000492099 C1QTNF8P60827 252 aa35.35■■■■□ 3.25
SH3GL3-204ENST00000492099 CCDC184Q52MB2 194 aa35.35■■■■□ 3.25
SH3GL3-204ENST00000492099 SRGNP10124 158 aa35.34■■■■□ 3.25
SH3GL3-204ENST00000492099 CALD1Q05682 793 aaKnown RBP35.34■■■■□ 3.25
SH3GL3-204ENST00000492099 ZBTB3Q9H5J0 574 aa35.34■■■■□ 3.25
SH3GL3-204ENST00000492099 STYK1Q6J9G0 422 aa35.33■■■■□ 3.25
SH3GL3-204ENST00000492099 LRP10Q7Z4F1 713 aa35.33■■■■□ 3.25
SH3GL3-204ENST00000492099 CNKSR1Q969H4 720 aa35.33■■■■□ 3.25
SH3GL3-204ENST00000492099 FAM177BA6PVY3 158 aa35.32■■■■□ 3.24
SH3GL3-204ENST00000492099 MASTLQ96GX5 879 aa35.32■■■■□ 3.24
SH3GL3-204ENST00000492099 NYXQ9GZU5 481 aa35.32■■■■□ 3.24
SH3GL3-204ENST00000492099 HOXB7P09629 217 aa35.31■■■■□ 3.24
SH3GL3-204ENST00000492099 GTF2E1P29083 439 aaPredicted RBP35.31■■■■□ 3.24
SH3GL3-204ENST00000492099 KRT24Q2M2I5 525 aa35.31■■■■□ 3.24
SH3GL3-204ENST00000492099 GIGYF2Q6Y7W6 1299 aaKnown RBP35.31■■■■□ 3.24
SH3GL3-204ENST00000492099 NECTIN2Q92692 538 aa35.3■■■■□ 3.24
SH3GL3-204ENST00000492099 RNF181Q9P0P0 153 aa35.3■■■■□ 3.24
SH3GL3-204ENST00000492099 KLRG2A4D1S0 409 aaPredicted RBP35.29■■■■□ 3.24
SH3GL3-204ENST00000492099 PROSER3Q2NL68 480 aa35.29■■■■□ 3.24
SH3GL3-204ENST00000492099 ZNF853P0CG23 659 aa35.28■■■■□ 3.24
SH3GL3-204ENST00000492099 DDX21Q9NR30 783 aaKnown RBP eCLIP35.28■■■■□ 3.24
SH3GL3-204ENST00000492099 MBIPQ9NS73 344 aa35.28■■■■□ 3.24
SH3GL3-204ENST00000492099 IFT57Q9NWB7 429 aa35.28■■■■□ 3.24
SH3GL3-204ENST00000492099 COL11A2P13942 1736 aaPredicted RBP35.27■■■■□ 3.24
SH3GL3-204ENST00000492099 ANXA1P04083 346 aa35.27■■■■□ 3.24
SH3GL3-204ENST00000492099 MRS2Q9HD23 443 aa35.27■■■■□ 3.24
SH3GL3-204ENST00000492099 NUP98P52948 1817 aa35.27■■■■□ 3.24
SH3GL3-204ENST00000492099 NPR1P16066 1061 aa35.26■■■■□ 3.24
SH3GL3-204ENST00000492099 GNAI1P63096 354 aa35.26■■■■□ 3.24
SH3GL3-204ENST00000492099 ZNF34Q8IZ26 560 aa35.26■■■■□ 3.24
SH3GL3-204ENST00000492099 C21orf2O43822 256 aa35.25■■■■□ 3.23
SH3GL3-204ENST00000492099 GPTP24298 496 aa35.25■■■■□ 3.23
SH3GL3-204ENST00000492099 RASSF7Q02833 373 aa35.25■■■■□ 3.23
SH3GL3-204ENST00000492099 HDGFL1Q5TGJ6 251 aa35.25■■■■□ 3.23
SH3GL3-204ENST00000492099 LMNB1P20700 586 aa35.24■■■■□ 3.23
SH3GL3-204ENST00000492099 COPS6Q7L5N1 327 aa35.24■■■■□ 3.23
SH3GL3-204ENST00000492099 IBTKQ9P2D0 1353 aaPredicted RBP35.24■■■■□ 3.23
SH3GL3-204ENST00000492099 PRPF40BQ6NWY9 871 aaKnown RBP35.23■■■■□ 3.23
SH3GL3-204ENST00000492099 UBN2Q6ZU65 1347 aa35.23■■■■□ 3.23
SH3GL3-204ENST00000492099 PARP10Q53GL7 1025 aa35.22■■■■□ 3.23
SH3GL3-204ENST00000492099 DUSP27Q5VZP5 1158 aa35.22■■■■□ 3.23
SH3GL3-204ENST00000492099 XAGE3Q8WTP9 111 aa35.22■■■■□ 3.23
SH3GL3-204ENST00000492099 ZNF219Q9P2Y4 722 aaPredicted RBP35.22■■■■□ 3.23
SH3GL3-204ENST00000492099 AIMP1Q12904 312 aaKnown RBP35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 SOGA3Q5TF21 947 aa35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 SUSD4Q5VX71 490 aa35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 PPP1R42Q7Z4L9 355 aa35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 NUTM1Q86Y26 1132 aa35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 CHPF2Q9P2E5 772 aa35.21■■■■□ 3.23
SH3GL3-204ENST00000492099 NFKBIEO00221 500 aa35.2■■■■□ 3.23
SH3GL3-204ENST00000492099 HSP90AB3PQ58FF7 597 aa35.2■■■■□ 3.23
SH3GL3-204ENST00000492099 DBF4Q9UBU7 674 aaPredicted RBP35.2■■■■□ 3.23
SH3GL3-204ENST00000492099 ZC3H4Q9UPT8 1303 aaKnown RBP35.2■■■■□ 3.23
SH3GL3-204ENST00000492099 SBF1O95248 1867 aa35.2■■■■□ 3.22
SH3GL3-204ENST00000492099 ERFEQ4G0M1 354 aa35.19■■■■□ 3.22
SH3GL3-204ENST00000492099 CCDC27Q2M243 656 aa35.18■■■■□ 3.22
SH3GL3-204ENST00000492099 KIF3CO14782 793 aa35.17■■■■□ 3.22
SH3GL3-204ENST00000492099 ALDH1B1P30837 517 aa35.17■■■■□ 3.22
SH3GL3-204ENST00000492099 ABCC12Q96J65 1359 aa35.16■■■■□ 3.22
SH3GL3-204ENST00000492099 NTSR2O95665 410 aa35.16■■■■□ 3.22
SH3GL3-204ENST00000492099 SLX4Q8IY92 1834 aa35.16■■■■□ 3.22
SH3GL3-204ENST00000492099 RIC1Q4ADV7 1423 aa35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 KDM2BQ8NHM5 1336 aa35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 PRELPP51888 382 aa35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 CRY2Q49AN0 593 aa35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 NCBP3Q53F19 620 aaKnown RBP35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 HYPKQ9NX55 129 aa35.15■■■■□ 3.22
SH3GL3-204ENST00000492099 LTBP3Q9NS15 1303 aa35.14■■■■□ 3.22
SH3GL3-204ENST00000492099 C7orf43Q8WVR3 580 aa35.14■■■■□ 3.22
SH3GL3-204ENST00000492099 UTP14AQ9BVJ6 771 aaKnown RBP35.14■■■■□ 3.22
SH3GL3-204ENST00000492099 ARFGEF2Q9Y6D5 1785 aa35.13■■■■□ 3.21
SH3GL3-204ENST00000492099 TCIRG1Q13488 830 aa35.13■■■■□ 3.21
SH3GL3-204ENST00000492099 TAOK3Q9H2K8 898 aa35.13■■■■□ 3.21
SH3GL3-204ENST00000492099 CHMP4AQ9BY43 222 aa35.12■■■■□ 3.21
SH3GL3-204ENST00000492099 CCDC93Q567U6 631 aa35.11■■■■□ 3.21
SH3GL3-204ENST00000492099 WWC1Q8IX03 1113 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms