RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 RGL2O15211 777 aa19.71■□□□□ 0.75
SS18L1-204ENST00000491916 HDGFL1Q5TGJ6 251 aa19.71■□□□□ 0.75
SS18L1-204ENST00000491916 CLEC4GQ6UXB4 293 aa19.71■□□□□ 0.75
SS18L1-204ENST00000491916 CHPF2Q9P2E5 772 aa19.71■□□□□ 0.75
SS18L1-204ENST00000491916 PARP3Q9Y6F1 533 aa19.71■□□□□ 0.75
SS18L1-204ENST00000491916 MAP3K15Q6ZN16 1313 aa19.7■□□□□ 0.74
SS18L1-204ENST00000491916 ERVV-1B6SEH8 477 aa19.69■□□□□ 0.74
SS18L1-204ENST00000491916 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
SS18L1-204ENST00000491916 NUP98P52948 1817 aa19.69■□□□□ 0.74
SS18L1-204ENST00000491916 SERPINB2P05120 415 aa19.68■□□□□ 0.74
SS18L1-204ENST00000491916 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
SS18L1-204ENST00000491916 COPS6Q7L5N1 327 aa19.67■□□□□ 0.74
SS18L1-204ENST00000491916 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
SS18L1-204ENST00000491916 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
SS18L1-204ENST00000491916 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
SS18L1-204ENST00000491916 ZBTB3Q9H5J0 574 aa19.66■□□□□ 0.74
SS18L1-204ENST00000491916 DBF4Q9UBU7 674 aaPredicted RBP19.66■□□□□ 0.74
SS18L1-204ENST00000491916 VAMP4O75379 141 aa19.65■□□□□ 0.74
SS18L1-204ENST00000491916 KCNA3P22001 575 aa19.65■□□□□ 0.74
SS18L1-204ENST00000491916 EXOSC9Q06265 439 aaKnown RBP19.65■□□□□ 0.74
SS18L1-204ENST00000491916 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
SS18L1-204ENST00000491916 CARMIL3Q8ND23 1372 aa19.65■□□□□ 0.74
SS18L1-204ENST00000491916 GIGYF2Q6Y7W6 1299 aaKnown RBP19.64■□□□□ 0.73
SS18L1-204ENST00000491916 SETDB2Q96T68 719 aa19.64■□□□□ 0.73
SS18L1-204ENST00000491916 ATP10DQ9P241 1426 aa19.64■□□□□ 0.73
SS18L1-204ENST00000491916 N4BP2Q86UW6 1770 aaPredicted RBP19.64■□□□□ 0.73
SS18L1-204ENST00000491916 ANKRD31Q8N7Z5 1873 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 UBN2Q6ZU65 1347 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 TGFB2P61812 414 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 GOLGA2Q08379 1002 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 AIMP1Q12904 312 aaKnown RBP19.63■□□□□ 0.73
SS18L1-204ENST00000491916 PRR5LQ6MZQ0 368 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 ZNF34Q8IZ26 560 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 TRMT2AQ8IZ69 625 aaKnown RBP19.63■□□□□ 0.73
SS18L1-204ENST00000491916 CDCA7LQ96GN5 454 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 PHAXQ9H814 394 aaKnown RBP19.63■□□□□ 0.73
SS18L1-204ENST00000491916 HYPKQ9NX55 129 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 ZNF652Q9Y2D9 606 aa19.63■□□□□ 0.73
SS18L1-204ENST00000491916 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
SS18L1-204ENST00000491916 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
SS18L1-204ENST00000491916 NIP7Q9Y221 180 aaKnown RBP eCLIP19.62■□□□□ 0.73
SS18L1-204ENST00000491916 BRCA1P38398 1863 aaKnown RBP19.61■□□□□ 0.73
SS18L1-204ENST00000491916 DPEP1P16444 411 aa19.61■□□□□ 0.73
SS18L1-204ENST00000491916 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.73
SS18L1-204ENST00000491916 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
SS18L1-204ENST00000491916 CCDC24Q8N4L8 307 aa19.61■□□□□ 0.73
SS18L1-204ENST00000491916 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
SS18L1-204ENST00000491916 E9PSI1 815 aa19.59■□□□□ 0.73
SS18L1-204ENST00000491916 ANKRD13DQ6ZTN6 518 aa19.59■□□□□ 0.73
SS18L1-204ENST00000491916 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
SS18L1-204ENST00000491916 GPTP24298 496 aa19.58■□□□□ 0.72
SS18L1-204ENST00000491916 CHRNA5P30532 468 aa19.58■□□□□ 0.72
SS18L1-204ENST00000491916 TCIRG1Q13488 830 aa19.58■□□□□ 0.72
SS18L1-204ENST00000491916 SUSD4Q5VX71 490 aa19.58■□□□□ 0.72
SS18L1-204ENST00000491916 G2E3Q7L622 706 aa19.58■□□□□ 0.72
SS18L1-204ENST00000491916 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
SS18L1-204ENST00000491916 CNBD1Q8NA66 436 aa19.57■□□□□ 0.72
SS18L1-204ENST00000491916 BRIP1Q9BX63 1249 aa19.57■□□□□ 0.72
SS18L1-204ENST00000491916 NTSR2O95665 410 aa19.56■□□□□ 0.72
SS18L1-204ENST00000491916 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
SS18L1-204ENST00000491916 CHMP4AQ9BY43 222 aa19.56■□□□□ 0.72
SS18L1-204ENST00000491916 WWC3Q9ULE0 1092 aa19.56■□□□□ 0.72
SS18L1-204ENST00000491916 ARFGEF2Q9Y6D5 1785 aa19.56■□□□□ 0.72
SS18L1-204ENST00000491916 IBTKQ9P2D0 1353 aaPredicted RBP19.56■□□□□ 0.72
SS18L1-204ENST00000491916 CACNA1FO60840 1977 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 KLRG2A4D1S0 409 aaPredicted RBP19.55■□□□□ 0.72
SS18L1-204ENST00000491916 FAM177BA6PVY3 158 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 COL11A2P13942 1736 aaPredicted RBP19.55■□□□□ 0.72
SS18L1-204ENST00000491916 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 ISCA1Q9BUE6 129 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 ABCC12Q96J65 1359 aa19.55■□□□□ 0.72
SS18L1-204ENST00000491916 GPR162Q16538 588 aa19.54■□□□□ 0.72
SS18L1-204ENST00000491916 NLRP10Q86W26 655 aa19.54■□□□□ 0.72
SS18L1-204ENST00000491916 ERFEQ4G0M1 354 aa19.53■□□□□ 0.72
SS18L1-204ENST00000491916 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
SS18L1-204ENST00000491916 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
SS18L1-204ENST00000491916 ADCY9O60503 1353 aa19.53■□□□□ 0.72
SS18L1-204ENST00000491916 TNRC6CQ9HCJ0 1690 aaKnown RBP19.52■□□□□ 0.72
SS18L1-204ENST00000491916 TRIM28Q13263 835 aaKnown RBP19.52■□□□□ 0.72
SS18L1-204ENST00000491916 HSP90AB3PQ58FF7 597 aa19.52■□□□□ 0.72
SS18L1-204ENST00000491916 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
SS18L1-204ENST00000491916 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
SS18L1-204ENST00000491916 STK31Q9BXU1 1019 aa19.52■□□□□ 0.72
SS18L1-204ENST00000491916 SRGNP10124 158 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 PDE6BP35913 854 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 ST5P78524 1137 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
SS18L1-204ENST00000491916 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
SS18L1-204ENST00000491916 NYXQ9GZU5 481 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
SS18L1-204ENST00000491916 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
SS18L1-204ENST00000491916 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
SS18L1-204ENST00000491916 FLIIQ13045 1269 aa19.5■□□□□ 0.71
SS18L1-204ENST00000491916 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
SS18L1-204ENST00000491916 RIC3Q7Z5B4 369 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms