RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
NUP50-217ENST00000491860 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
NUP50-217ENST00000491860 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
NUP50-217ENST00000491860 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 KCNQ3O43525 872 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
NUP50-217ENST00000491860 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
NUP50-217ENST00000491860 KDM3BQ7LBC6 1761 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 CAPN15O75808 1086 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
NUP50-217ENST00000491860 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
NUP50-217ENST00000491860 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 NBPF5PQ86XG9 351 aaPredicted RBP11.54□□□□□ -0.56
NUP50-217ENST00000491860 MASTLQ96GX5 879 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 PLEKHF1Q96S99 279 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
NUP50-217ENST00000491860 DCTN1Q14203 1278 aa11.53□□□□□ -0.56
NUP50-217ENST00000491860 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
NUP50-217ENST00000491860 ARFGEF2Q9Y6D5 1785 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 RASSF7Q02833 373 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 NYXQ9GZU5 481 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 MYBBP1AQ9BQG0 1328 aaKnown RBP11.52□□□□□ -0.57
NUP50-217ENST00000491860 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
NUP50-217ENST00000491860 DICER1Q9UPY3 1922 aaKnown RBP11.51□□□□□ -0.57
NUP50-217ENST00000491860 SRGNP10124 158 aa11.51□□□□□ -0.57
NUP50-217ENST00000491860 EIF4A1P60842 406 aaKnown RBP11.51□□□□□ -0.57
NUP50-217ENST00000491860 KIF6Q6ZMV9 814 aa11.51□□□□□ -0.57
NUP50-217ENST00000491860 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
NUP50-217ENST00000491860 FER1L6Q2WGJ9 1857 aa11.51□□□□□ -0.57
NUP50-217ENST00000491860 COL11A2P13942 1736 aaPredicted RBP11.5□□□□□ -0.57
NUP50-217ENST00000491860 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
NUP50-217ENST00000491860 NPR1P16066 1061 aa11.5□□□□□ -0.57
NUP50-217ENST00000491860 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
NUP50-217ENST00000491860 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
NUP50-217ENST00000491860 POTECB2RU33 542 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 NFKBIEO00221 500 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 C21orf2O43822 256 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 RIPK4P57078 832 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
NUP50-217ENST00000491860 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
NUP50-217ENST00000491860 IBTKQ9P2D0 1353 aaPredicted RBP11.49□□□□□ -0.57
NUP50-217ENST00000491860 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
NUP50-217ENST00000491860 WDR43Q15061 677 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP50-217ENST00000491860 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
NUP50-217ENST00000491860 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 MAP3K15Q6ZN16 1313 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 NUP98P52948 1817 aa11.48□□□□□ -0.57
NUP50-217ENST00000491860 CACNA1SQ13698 1873 aa11.47□□□□□ -0.57
NUP50-217ENST00000491860 RIC1Q4ADV7 1423 aa11.47□□□□□ -0.57
NUP50-217ENST00000491860 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
NUP50-217ENST00000491860 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
NUP50-217ENST00000491860 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
NUP50-217ENST00000491860 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
NUP50-217ENST00000491860 TMPOP42166 694 aaKnown RBP11.46□□□□□ -0.57
NUP50-217ENST00000491860 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
NUP50-217ENST00000491860 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
NUP50-217ENST00000491860 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
NUP50-217ENST00000491860 PRDM10Q9NQV6 1147 aa11.46□□□□□ -0.57
NUP50-217ENST00000491860 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
NUP50-217ENST00000491860 HLFQ16534 295 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 HSP90AB3PQ58FF7 597 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 GIGYF2Q6Y7W6 1299 aaKnown RBP11.45□□□□□ -0.58
NUP50-217ENST00000491860 PPP1R42Q7Z4L9 355 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
NUP50-217ENST00000491860 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
NUP50-217ENST00000491860 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 HOXB7P09629 217 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 MYL6BP14649 208 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP50-217ENST00000491860 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 NGEFQ8N5V2 710 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
NUP50-217ENST00000491860 THUMPD2Q9BTF0 503 aaKnown RBP11.44□□□□□ -0.58
NUP50-217ENST00000491860 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
NUP50-217ENST00000491860 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
NUP50-217ENST00000491860 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
NUP50-217ENST00000491860 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
NUP50-217ENST00000491860 CHMP4AQ9BY43 222 aa11.43□□□□□ -0.58
NUP50-217ENST00000491860 SCN4AP35499 1836 aa11.43□□□□□ -0.58
NUP50-217ENST00000491860 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
NUP50-217ENST00000491860 FOXN1O15353 648 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms