RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 NFKBIEO00221 500 aa14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 TNS4Q8IZW8 715 aa14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 TTLL6Q8N841 843 aa14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
TMEM39A-211ENST00000491685 H0YIN7 160 aa14.59□□□□□ -0.07
TMEM39A-211ENST00000491685 CAPN15O75808 1086 aa14.59□□□□□ -0.07
TMEM39A-211ENST00000491685 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
TMEM39A-211ENST00000491685 HTATSF1O43719 755 aaKnown RBP14.58□□□□□ -0.08
TMEM39A-211ENST00000491685 SNRPA1P09661 255 aaKnown RBP14.58□□□□□ -0.08
TMEM39A-211ENST00000491685 BRIP1Q9BX63 1249 aa14.58□□□□□ -0.08
TMEM39A-211ENST00000491685 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
TMEM39A-211ENST00000491685 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
TMEM39A-211ENST00000491685 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.08
TMEM39A-211ENST00000491685 SETDB2Q96T68 719 aa14.57□□□□□ -0.08
TMEM39A-211ENST00000491685 PRKRIP1Q9H875 184 aaPredicted RBP14.57□□□□□ -0.08
TMEM39A-211ENST00000491685 C21orf2O43822 256 aa14.56□□□□□ -0.08
TMEM39A-211ENST00000491685 TAF7Q15545 349 aaPredicted RBP14.56□□□□□ -0.08
TMEM39A-211ENST00000491685 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
TMEM39A-211ENST00000491685 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
TMEM39A-211ENST00000491685 LMNB1P20700 586 aa14.55□□□□□ -0.08
TMEM39A-211ENST00000491685 PDE6BP35913 854 aa14.55□□□□□ -0.08
TMEM39A-211ENST00000491685 NFE2L2Q16236 605 aa14.55□□□□□ -0.08
TMEM39A-211ENST00000491685 NPM2Q86SE8 214 aaKnown RBP14.55□□□□□ -0.08
TMEM39A-211ENST00000491685 SMC1BQ8NDV3 1235 aa14.55□□□□□ -0.08
TMEM39A-211ENST00000491685 NEFMP07197 916 aa14.54□□□□□ -0.08
TMEM39A-211ENST00000491685 HLFQ16534 295 aa14.54□□□□□ -0.08
TMEM39A-211ENST00000491685 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
TMEM39A-211ENST00000491685 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
TMEM39A-211ENST00000491685 ANKRD36CQ5JPF3 1778 aa14.53□□□□□ -0.08
TMEM39A-211ENST00000491685 SRGNP10124 158 aa14.53□□□□□ -0.08
TMEM39A-211ENST00000491685 ST5P78524 1137 aa14.53□□□□□ -0.08
TMEM39A-211ENST00000491685 PRPF40BQ6NWY9 871 aaKnown RBP14.53□□□□□ -0.08
TMEM39A-211ENST00000491685 ABCC12Q96J65 1359 aa14.52□□□□□ -0.08
TMEM39A-211ENST00000491685 FAM177BA6PVY3 158 aa14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 NPHP1O15259 732 aa14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 STYK1Q6J9G0 422 aa14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 CLEC4GQ6UXB4 293 aa14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 NBPF5PQ86XG9 351 aaPredicted RBP14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.09
TMEM39A-211ENST00000491685 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 GLTPD2A6NH11 291 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 NGEFQ8N5V2 710 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 MASTLQ96GX5 879 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 ZNF652Q9Y2D9 606 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 LAMB2P55268 1798 aa14.51□□□□□ -0.09
TMEM39A-211ENST00000491685 POTECB2RU33 542 aa14.5□□□□□ -0.09
TMEM39A-211ENST00000491685 HSPA1AP0DMV8 641 aaKnown RBP14.5□□□□□ -0.09
TMEM39A-211ENST00000491685 HSPA1BP0DMV9 641 aaKnown RBP14.5□□□□□ -0.09
TMEM39A-211ENST00000491685 OLFM4Q6UX06 510 aa14.5□□□□□ -0.09
TMEM39A-211ENST00000491685 TTLL7Q6ZT98 887 aa14.5□□□□□ -0.09
TMEM39A-211ENST00000491685 LTBP3Q9NS15 1303 aa14.49□□□□□ -0.09
TMEM39A-211ENST00000491685 PNISRQ8TF01 805 aaKnown RBP14.49□□□□□ -0.09
TMEM39A-211ENST00000491685 CNKSR1Q969H4 720 aa14.49□□□□□ -0.09
TMEM39A-211ENST00000491685 TAOK3Q9H2K8 898 aa14.49□□□□□ -0.09
TMEM39A-211ENST00000491685 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 KLRG2A4D1S0 409 aaPredicted RBP14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 MYL6BP14649 208 aa14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 SLC51AQ86UW1 340 aa14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 C7orf43Q8WVR3 580 aa14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 RRP7AQ9Y3A4 280 aaKnown RBP14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 SNED1Q8TER0 1413 aa14.48□□□□□ -0.09
TMEM39A-211ENST00000491685 MAP3K15Q6ZN16 1313 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 COL4A5P29400 1685 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 RGL2O15211 777 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 VEGFAP15692 232 aaPredicted RBP14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 ERFEQ4G0M1 354 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 NUTM1Q86Y26 1132 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
TMEM39A-211ENST00000491685 NPR1P16066 1061 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 GPTP24298 496 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 TPTE2Q6XPS3 522 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 LRP10Q7Z4F1 713 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 CCDC146Q8IYE0 955 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 TSPYL4Q9UJ04 414 aa14.46□□□□□ -0.09
TMEM39A-211ENST00000491685 SCN4AP35499 1836 aa14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 ANXA1P04083 346 aa14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 TMPOP42166 694 aaKnown RBP14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 RIPK4P57078 832 aa14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 PROSER3Q2NL68 480 aa14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
TMEM39A-211ENST00000491685 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 ERVV-1B6SEH8 477 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 DDNO94850 711 aaPredicted RBP14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 PDIA6Q15084 440 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 CCDC93Q567U6 631 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 KIF6Q6ZMV9 814 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 IBTKQ9P2D0 1353 aaPredicted RBP14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 TAF1P21675 1872 aa14.44□□□□□ -0.1
TMEM39A-211ENST00000491685 ZNF541Q9H0D2 1346 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 CRY2Q49AN0 593 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 SUSD4Q5VX71 490 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms