RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 NBPF6Q5VWK0 638 aa13.94□□□□□ -0.18
PCYT1A-216ENST00000491544 NBPF4Q96M43 638 aa13.94□□□□□ -0.18
PCYT1A-216ENST00000491544 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
PCYT1A-216ENST00000491544 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 H0YIN7 160 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 TATP17735 454 aaPredicted RBP13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 PPP2R1AP30153 589 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 CENPFP49454 3210 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 CARMIL3Q8ND23 1372 aa13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
PCYT1A-216ENST00000491544 HOXC9P31274 260 aa13.92□□□□□ -0.18
PCYT1A-216ENST00000491544 NRXN2Q9P2S2 1712 aa13.92□□□□□ -0.18
PCYT1A-216ENST00000491544 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
PCYT1A-216ENST00000491544 MYBBP1AQ9BQG0 1328 aaKnown RBP13.91□□□□□ -0.18
PCYT1A-216ENST00000491544 AMPHP49418 695 aa13.91□□□□□ -0.18
PCYT1A-216ENST00000491544 PKN2Q16513 984 aaKnown RBP13.91□□□□□ -0.18
PCYT1A-216ENST00000491544 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
PCYT1A-216ENST00000491544 TRPA1O75762 1119 aa13.9□□□□□ -0.18
PCYT1A-216ENST00000491544 CELF2O95319 508 aaKnown RBP13.9□□□□□ -0.18
PCYT1A-216ENST00000491544 MTHFSP49914 203 aa13.9□□□□□ -0.18
PCYT1A-216ENST00000491544 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
PCYT1A-216ENST00000491544 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
PCYT1A-216ENST00000491544 CEP290O15078 2479 aa13.89□□□□□ -0.19
PCYT1A-216ENST00000491544 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
PCYT1A-216ENST00000491544 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
PCYT1A-216ENST00000491544 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
PCYT1A-216ENST00000491544 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
PCYT1A-216ENST00000491544 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
PCYT1A-216ENST00000491544 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
PCYT1A-216ENST00000491544 FLT4P35916 1363 aa13.88□□□□□ -0.19
PCYT1A-216ENST00000491544 MIER1Q8N108 512 aa13.88□□□□□ -0.19
PCYT1A-216ENST00000491544 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.191e-7■□□□□ 10.7
PCYT1A-216ENST00000491544 NFIXQ14938 502 aa13.87□□□□□ -0.19
PCYT1A-216ENST00000491544 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
PCYT1A-216ENST00000491544 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
PCYT1A-216ENST00000491544 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
PCYT1A-216ENST00000491544 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
PCYT1A-216ENST00000491544 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
PCYT1A-216ENST00000491544 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
PCYT1A-216ENST00000491544 GPC2Q8N158 579 aa13.86□□□□□ -0.19
PCYT1A-216ENST00000491544 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
PCYT1A-216ENST00000491544 SERPINB2P05120 415 aa13.85□□□□□ -0.19
PCYT1A-216ENST00000491544 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
PCYT1A-216ENST00000491544 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
PCYT1A-216ENST00000491544 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
PCYT1A-216ENST00000491544 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
PCYT1A-216ENST00000491544 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
PCYT1A-216ENST00000491544 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
PCYT1A-216ENST00000491544 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.2
PCYT1A-216ENST00000491544 CRKLP46109 303 aaKnown RBP13.83□□□□□ -0.2
PCYT1A-216ENST00000491544 FBXO46Q6PJ61 603 aaPredicted RBP13.83□□□□□ -0.2
PCYT1A-216ENST00000491544 MRS2Q9HD23 443 aa13.83□□□□□ -0.2
PCYT1A-216ENST00000491544 H0YGN5 161 aa13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 FZD9O00144 591 aa13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 KIF23Q02241 960 aaPredicted RBP13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
PCYT1A-216ENST00000491544 ZPR1O75312 459 aa13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 EPS15P42566 896 aa13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 PRPF40BQ6NWY9 871 aaKnown RBP13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 ZNF408Q9H9D4 720 aa13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
PCYT1A-216ENST00000491544 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
PCYT1A-216ENST00000491544 SCNN1DP51172 638 aa13.8□□□□□ -0.2
PCYT1A-216ENST00000491544 HUNKP57058 714 aa13.8□□□□□ -0.2
PCYT1A-216ENST00000491544 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
PCYT1A-216ENST00000491544 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
PCYT1A-216ENST00000491544 COL9A1P20849 921 aa13.79□□□□□ -0.2
PCYT1A-216ENST00000491544 ZNF296Q8WUU4 475 aaPredicted RBP13.79□□□□□ -0.2
PCYT1A-216ENST00000491544 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
PCYT1A-216ENST00000491544 BCORQ6W2J9 1755 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 ANKRD31Q8N7Z5 1873 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 IL13P35225 146 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 GJA3Q9Y6H8 435 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 MUC3AQ02505 3323 aa13.78□□□□□ -0.2
PCYT1A-216ENST00000491544 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
PCYT1A-216ENST00000491544 PDE6BP35913 854 aa13.77□□□□□ -0.21
PCYT1A-216ENST00000491544 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
PCYT1A-216ENST00000491544 RGMBQ6NW40 437 aa13.77□□□□□ -0.21
PCYT1A-216ENST00000491544 CNKSR1Q969H4 720 aa13.77□□□□□ -0.21
PCYT1A-216ENST00000491544 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 PLA2G5P39877 138 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 WDR43Q15061 677 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 EYA1Q99502 592 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 BRIP1Q9BX63 1249 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
PCYT1A-216ENST00000491544 HMOX1P09601 288 aa13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
PCYT1A-216ENST00000491544 EN2P19622 333 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms