RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NGEFQ8N5V2 710 aa10.86□□□□□ -0.67
LSM2-213ENST00000491421 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
LSM2-213ENST00000491421 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
LSM2-213ENST00000491421 ARFGEF1Q9Y6D6 1849 aa10.85□□□□□ -0.67
LSM2-213ENST00000491421 BCORQ6W2J9 1755 aa10.85□□□□□ -0.67
LSM2-213ENST00000491421 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 SRGNP10124 158 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 MYL6BP14649 208 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 LMNB1P20700 586 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 HLFQ16534 295 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 STYK1Q6J9G0 422 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 PRKRIP1Q9H875 184 aaPredicted RBP10.84□□□□□ -0.67
LSM2-213ENST00000491421 NMRK2Q9NPI5 230 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 BABAM1Q9NWV8 329 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
LSM2-213ENST00000491421 KDM3BQ7LBC6 1761 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
LSM2-213ENST00000491421 LAMB4A4D0S4 1761 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 ERVV-1B6SEH8 477 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 NFKBIEO00221 500 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 C21orf2O43822 256 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 MASTLQ96GX5 879 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 ADAMTS8Q9UP79 889 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 DLG5Q8TDM6 1919 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 CEP350Q5VT06 3117 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 ERBB4Q15303 1308 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 MAP3K15Q6ZN16 1313 aa10.83□□□□□ -0.68
LSM2-213ENST00000491421 ZC3H4Q9UPT8 1303 aaKnown RBP10.83□□□□□ -0.68
LSM2-213ENST00000491421 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
LSM2-213ENST00000491421 TOMM70O94826 608 aa10.82□□□□□ -0.68
LSM2-213ENST00000491421 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
LSM2-213ENST00000491421 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
LSM2-213ENST00000491421 PRPF40BQ6NWY9 871 aaKnown RBP10.82□□□□□ -0.68
LSM2-213ENST00000491421 TTLL7Q6ZT98 887 aa10.82□□□□□ -0.68
LSM2-213ENST00000491421 ZBTB3Q9H5J0 574 aa10.82□□□□□ -0.68
LSM2-213ENST00000491421 ANKRD31Q8N7Z5 1873 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 NPR1P16066 1061 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 HSPA6P17066 643 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 PRELPP51888 382 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 SOGA3Q5TF21 947 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 C16orf71Q8IYS4 520 aaPredicted RBP10.81□□□□□ -0.68
LSM2-213ENST00000491421 NYXQ9GZU5 481 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
LSM2-213ENST00000491421 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
LSM2-213ENST00000491421 COL11A2P13942 1736 aaPredicted RBP10.81□□□□□ -0.68
LSM2-213ENST00000491421 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
LSM2-213ENST00000491421 CHL1O00533 1208 aa10.8□□□□□ -0.68
LSM2-213ENST00000491421 GPTP24298 496 aa10.8□□□□□ -0.68
LSM2-213ENST00000491421 ZEB1P37275 1124 aaPredicted RBP10.8□□□□□ -0.68
LSM2-213ENST00000491421 PDIA6Q15084 440 aa10.8□□□□□ -0.68
LSM2-213ENST00000491421 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
LSM2-213ENST00000491421 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 GIGYF2Q6Y7W6 1299 aaKnown RBP10.79□□□□□ -0.68
LSM2-213ENST00000491421 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 RRAGCQ9HB90 399 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 UBN2Q6ZU65 1347 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 LTBP3Q9NS15 1303 aa10.79□□□□□ -0.68
LSM2-213ENST00000491421 ABCC12Q96J65 1359 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 IBTKQ9P2D0 1353 aaPredicted RBP10.78□□□□□ -0.68
LSM2-213ENST00000491421 GLTPD2A6NH11 291 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 ANXA1P04083 346 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 KRT24Q2M2I5 525 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 ERFEQ4G0M1 354 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 CCDC93Q567U6 631 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 LRP10Q7Z4F1 713 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 ZNF34Q8IZ26 560 aa10.78□□□□□ -0.68
LSM2-213ENST00000491421 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
LSM2-213ENST00000491421 ALDH1B1P30837 517 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 AIMP1Q12904 312 aaKnown RBP10.77□□□□□ -0.69
LSM2-213ENST00000491421 CRY2Q49AN0 593 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
LSM2-213ENST00000491421 PARP10Q53GL7 1025 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 SUSD4Q5VX71 490 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 CFAP44Q96MT7 982 aa10.77□□□□□ -0.69
LSM2-213ENST00000491421 APAF1O14727 1248 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 NTSR2O95665 410 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 HOXB7P09629 217 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
LSM2-213ENST00000491421 APLP1P51693 650 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 PPP1R42Q7Z4L9 355 aa10.76□□□□□ -0.69
LSM2-213ENST00000491421 RPGRQ92834 1020 aaKnown RBP10.76□□□□□ -0.69
LSM2-213ENST00000491421 DDX21Q9NR30 783 aaKnown RBP eCLIP10.76□□□□□ -0.69
LSM2-213ENST00000491421 RIC1Q4ADV7 1423 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 FKBP4Q02790 459 aaKnown RBP eCLIP10.75□□□□□ -0.69
LSM2-213ENST00000491421 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
LSM2-213ENST00000491421 FSTL1Q12841 308 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 HSP90AB3PQ58FF7 597 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 OLFM4Q6UX06 510 aa10.75□□□□□ -0.69
LSM2-213ENST00000491421 RTKN2Q8IZC4 609 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms