RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
PTPRC-212ENST00000491302 FAM13BQ9NYF5 915 aa12.69□□□□□ -0.38
PTPRC-212ENST00000491302 KLK14Q9P0G3 267 aa12.69□□□□□ -0.38
PTPRC-212ENST00000491302 ZBTB39O15060 712 aa12.68□□□□□ -0.38
PTPRC-212ENST00000491302 PCSK2P16519 638 aa12.68□□□□□ -0.38
PTPRC-212ENST00000491302 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
PTPRC-212ENST00000491302 ETFBKMTQ8IXQ9 262 aa12.68□□□□□ -0.38
PTPRC-212ENST00000491302 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
PTPRC-212ENST00000491302 TREHO43280 583 aa12.67□□□□□ -0.38
PTPRC-212ENST00000491302 CTSOP43234 321 aaPredicted RBP12.67□□□□□ -0.38
PTPRC-212ENST00000491302 PLCB3Q01970 1234 aa12.67□□□□□ -0.38
PTPRC-212ENST00000491302 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
PTPRC-212ENST00000491302 ZAP70P43403 619 aa12.66□□□□□ -0.38
PTPRC-212ENST00000491302 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
PTPRC-212ENST00000491302 FAM129BQ96TA1 746 aa12.66□□□□□ -0.38
PTPRC-212ENST00000491302 SCARF1Q14162 830 aa12.65□□□□□ -0.38
PTPRC-212ENST00000491302 LYSMD3Q7Z3D4 306 aa12.65□□□□□ -0.38
PTPRC-212ENST00000491302 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
PTPRC-212ENST00000491302 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
PTPRC-212ENST00000491302 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
PTPRC-212ENST00000491302 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
PTPRC-212ENST00000491302 FAM26DQ5JW98 314 aa12.64□□□□□ -0.39
PTPRC-212ENST00000491302 NBPF10Q6P3W6 841 aaKnown RBP12.64□□□□□ -0.39
PTPRC-212ENST00000491302 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
PTPRC-212ENST00000491302 TTC16Q8NEE8 873 aa12.64□□□□□ -0.39
PTPRC-212ENST00000491302 ALKBH8Q96BT7 664 aaKnown RBP12.64□□□□□ -0.39
PTPRC-212ENST00000491302 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
PTPRC-212ENST00000491302 TGFBR3LH3BV60 316 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 PHKA2P46019 1235 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 FMR1Q06787 632 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPRC-212ENST00000491302 EHHADHQ08426 723 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 POU4F2Q12837 409 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 C6orf118Q5T5N4 469 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 PRICKLE2Q7Z3G6 844 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 EDEM1Q92611 657 aa12.63□□□□□ -0.39
PTPRC-212ENST00000491302 AVPP01185 164 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 P4HBP07237 508 aaKnown RBP12.62□□□□□ -0.39
PTPRC-212ENST00000491302 DSC3Q14574 896 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 IER5Q5VY09 327 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 GJD3Q8N144 294 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
PTPRC-212ENST00000491302 KIAA1522Q9P206 1035 aaPredicted RBP12.62□□□□□ -0.39
PTPRC-212ENST00000491302 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 MICAL2O94851 1124 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 PDGFAP04085 211 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 VAMP1P23763 118 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 ITGAEP38570 1179 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
PTPRC-212ENST00000491302 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
PTPRC-212ENST00000491302 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
PTPRC-212ENST00000491302 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
PTPRC-212ENST00000491302 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
PTPRC-212ENST00000491302 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
PTPRC-212ENST00000491302 IGHA2P01877 340 aa12.59□□□□□ -0.39
PTPRC-212ENST00000491302 TIMMDC1Q9NPL8 285 aa12.59□□□□□ -0.39
PTPRC-212ENST00000491302 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
PTPRC-212ENST00000491302 GPR182O15218 404 aa12.58□□□□□ -0.4
PTPRC-212ENST00000491302 NEFLP07196 543 aa12.58□□□□□ -0.4
PTPRC-212ENST00000491302 MAPK8P45983 427 aa12.58□□□□□ -0.4
PTPRC-212ENST00000491302 ATP2B2Q01814 1243 aa12.58□□□□□ -0.4
PTPRC-212ENST00000491302 GPR152Q8TDT2 470 aa12.58□□□□□ -0.4
PTPRC-212ENST00000491302 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
PTPRC-212ENST00000491302 ARSJQ5FYB0 599 aaPredicted RBP12.57□□□□□ -0.4
PTPRC-212ENST00000491302 LDHBP07195 334 aaKnown RBP12.56□□□□□ -0.4
PTPRC-212ENST00000491302 TAGLNQ01995 201 aaKnown RBP12.56□□□□□ -0.4
PTPRC-212ENST00000491302 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
PTPRC-212ENST00000491302 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
PTPRC-212ENST00000491302 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
PTPRC-212ENST00000491302 DGAT1O75907 488 aa12.55□□□□□ -0.4
PTPRC-212ENST00000491302 ATP4AP20648 1035 aa12.55□□□□□ -0.4
PTPRC-212ENST00000491302 FNDC3AQ9Y2H6 1198 aaKnown RBP12.55□□□□□ -0.4
PTPRC-212ENST00000491302 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
PTPRC-212ENST00000491302 MSX1P28360 303 aa12.54□□□□□ -0.4
PTPRC-212ENST00000491302 IDH3AP50213 366 aa12.54□□□□□ -0.4
PTPRC-212ENST00000491302 ARSDP51689 593 aa12.54□□□□□ -0.4
PTPRC-212ENST00000491302 XPCQ01831 940 aaPredicted RBP12.54□□□□□ -0.4
PTPRC-212ENST00000491302 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
PTPRC-212ENST00000491302 ZIC5Q96T25 663 aa12.54□□□□□ -0.4
PTPRC-212ENST00000491302 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
PTPRC-212ENST00000491302 RHOQP17081 205 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 HSH2DQ96JZ2 352 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 IGSF5Q9NSI5 407 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
PTPRC-212ENST00000491302 OPLAHO14841 1288 aa12.52□□□□□ -0.41
PTPRC-212ENST00000491302 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
PTPRC-212ENST00000491302 BTLAQ7Z6A9 289 aa12.52□□□□□ -0.41
PTPRC-212ENST00000491302 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
PTPRC-212ENST00000491302 EPB42P16452 691 aa12.51□□□□□ -0.41
PTPRC-212ENST00000491302 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
PTPRC-212ENST00000491302 AXIN1O15169 862 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 BMP1P13497 986 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 INPP5BP32019 993 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 LRRC69Q6ZNQ3 347 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
PTPRC-212ENST00000491302 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms