RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 TGFB2P61812 414 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 MMP10P09238 476 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
SUPT20H-220ENST00000490716 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
SUPT20H-220ENST00000490716 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
SUPT20H-220ENST00000490716 COL4A5P29400 1685 aa12.11□□□□□ -0.47
SUPT20H-220ENST00000490716 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
SUPT20H-220ENST00000490716 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
SUPT20H-220ENST00000490716 HLFQ16534 295 aa12.1□□□□□ -0.47
SUPT20H-220ENST00000490716 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SUPT20H-220ENST00000490716 A0A087WZG4 1122 aa12.1□□□□□ -0.47
SUPT20H-220ENST00000490716 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
SUPT20H-220ENST00000490716 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT20H-220ENST00000490716 ANP32CO43423 234 aa12.09□□□□□ -0.47
SUPT20H-220ENST00000490716 CRY2Q49AN0 593 aa12.09□□□□□ -0.47
SUPT20H-220ENST00000490716 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
SUPT20H-220ENST00000490716 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
SUPT20H-220ENST00000490716 RFC4P35249 363 aa12.08□□□□□ -0.48
SUPT20H-220ENST00000490716 PRELPP51888 382 aa12.08□□□□□ -0.48
SUPT20H-220ENST00000490716 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
SUPT20H-220ENST00000490716 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
SUPT20H-220ENST00000490716 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
SUPT20H-220ENST00000490716 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 POLD1P28340 1107 aa12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 PRR5LQ6MZQ0 368 aa12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 NTSR2O95665 410 aa12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
SUPT20H-220ENST00000490716 FANCIQ9NVI1 1328 aa12.06□□□□□ -0.48
SUPT20H-220ENST00000490716 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
SUPT20H-220ENST00000490716 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
SUPT20H-220ENST00000490716 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
SUPT20H-220ENST00000490716 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
SUPT20H-220ENST00000490716 GNAI1P63096 354 aa12.05□□□□□ -0.48
SUPT20H-220ENST00000490716 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
SUPT20H-220ENST00000490716 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
SUPT20H-220ENST00000490716 TRIM28Q13263 835 aaKnown RBP12.05□□□□□ -0.48
SUPT20H-220ENST00000490716 SERPINB2P05120 415 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 RNF123Q5XPI4 1314 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 VAMP4O75379 141 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 DUSP27Q5VZP5 1158 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
SUPT20H-220ENST00000490716 LAMB1P07942 1786 aa12.03□□□□□ -0.48
SUPT20H-220ENST00000490716 DPEP1P16444 411 aa12.03□□□□□ -0.48
SUPT20H-220ENST00000490716 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
SUPT20H-220ENST00000490716 SCN4AP35499 1836 aa12.03□□□□□ -0.48
SUPT20H-220ENST00000490716 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
SUPT20H-220ENST00000490716 SRGNP10124 158 aa12.02□□□□□ -0.48
SUPT20H-220ENST00000490716 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
SUPT20H-220ENST00000490716 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
SUPT20H-220ENST00000490716 LTBP3Q9NS15 1303 aa12.02□□□□□ -0.49
SUPT20H-220ENST00000490716 ZPR1O75312 459 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 CASP7P55210 303 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 SUSD4Q5VX71 490 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
SUPT20H-220ENST00000490716 PLBD2Q8NHP8 589 aa12□□□□□ -0.49
SUPT20H-220ENST00000490716 TSR2Q969E8 191 aaKnown RBP12□□□□□ -0.49
SUPT20H-220ENST00000490716 A0A0G2JLW4 131 aa12□□□□□ -0.49
SUPT20H-220ENST00000490716 STYK1Q6J9G0 422 aa12□□□□□ -0.49
SUPT20H-220ENST00000490716 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
SUPT20H-220ENST00000490716 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
SUPT20H-220ENST00000490716 NLRP10Q86W26 655 aa11.99□□□□□ -0.49
SUPT20H-220ENST00000490716 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
SUPT20H-220ENST00000490716 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
SUPT20H-220ENST00000490716 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
SUPT20H-220ENST00000490716 HYPKQ9NX55 129 aa11.99□□□□□ -0.49
SUPT20H-220ENST00000490716 MIER1Q8N108 512 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 NEFMP07197 916 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 COPS6Q7L5N1 327 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 XAGE3Q8WTP9 111 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 ANXA1P04083 346 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 CHRNA5P30532 468 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 PPP1R1BQ9UD71 204 aaPredicted RBP11.98□□□□□ -0.49
SUPT20H-220ENST00000490716 ZNF609O15014 1411 aa11.97□□□□□ -0.49
SUPT20H-220ENST00000490716 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
SUPT20H-220ENST00000490716 NFKBIEO00221 500 aa11.97□□□□□ -0.49
SUPT20H-220ENST00000490716 UTYO14607 1347 aa11.96□□□□□ -0.49
SUPT20H-220ENST00000490716 SLC51AQ86UW1 340 aa11.96□□□□□ -0.49
SUPT20H-220ENST00000490716 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.49
SUPT20H-220ENST00000490716 G2E3Q7L622 706 aa11.96□□□□□ -0.49
SUPT20H-220ENST00000490716 ERFEQ4G0M1 354 aa11.96□□□□□ -0.5
SUPT20H-220ENST00000490716 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 IRS2Q9Y4H2 1338 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 MYL6BP14649 208 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 PARP10Q53GL7 1025 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 CDHR2Q9BYE9 1310 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
SUPT20H-220ENST00000490716 MSH5O43196 834 aa11.94□□□□□ -0.5
SUPT20H-220ENST00000490716 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms