RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
VPS26A-207ENST00000490696 IL16Q14005 1332 aa19.99■□□□□ 0.79
VPS26A-207ENST00000490696 CARMIL3Q8ND23 1372 aa19.98■□□□□ 0.79
VPS26A-207ENST00000490696 ANXA1P04083 346 aa19.98■□□□□ 0.79
VPS26A-207ENST00000490696 YBX3P16989 372 aaKnown RBP eCLIP19.98■□□□□ 0.79
VPS26A-207ENST00000490696 ZNF652Q9Y2D9 606 aa19.98■□□□□ 0.79
VPS26A-207ENST00000490696 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
VPS26A-207ENST00000490696 ERVV-1B6SEH8 477 aa19.97■□□□□ 0.79
VPS26A-207ENST00000490696 HLFQ16534 295 aa19.97■□□□□ 0.79
VPS26A-207ENST00000490696 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
VPS26A-207ENST00000490696 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
VPS26A-207ENST00000490696 SETDB2Q96T68 719 aa19.97■□□□□ 0.79
VPS26A-207ENST00000490696 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
VPS26A-207ENST00000490696 MAP3K15Q6ZN16 1313 aa19.97■□□□□ 0.79
VPS26A-207ENST00000490696 A0A0G2JLW4 131 aa19.96■□□□□ 0.79
VPS26A-207ENST00000490696 DPEP1P16444 411 aa19.96■□□□□ 0.79
VPS26A-207ENST00000490696 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
VPS26A-207ENST00000490696 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
VPS26A-207ENST00000490696 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
VPS26A-207ENST00000490696 C8orf58Q8NAV2 365 aa19.96■□□□□ 0.79
VPS26A-207ENST00000490696 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
VPS26A-207ENST00000490696 N4BP2Q86UW6 1770 aaPredicted RBP19.95■□□□□ 0.78
VPS26A-207ENST00000490696 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
VPS26A-207ENST00000490696 KCNA3P22001 575 aa19.94■□□□□ 0.78
VPS26A-207ENST00000490696 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
VPS26A-207ENST00000490696 PRR5LQ6MZQ0 368 aa19.93■□□□□ 0.78
VPS26A-207ENST00000490696 TSPYL6Q8N831 410 aa19.93■□□□□ 0.78
VPS26A-207ENST00000490696 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
VPS26A-207ENST00000490696 DBF4Q9UBU7 674 aaPredicted RBP19.93■□□□□ 0.78
VPS26A-207ENST00000490696 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
VPS26A-207ENST00000490696 NIP7Q9Y221 180 aaKnown RBP eCLIP19.93■□□□□ 0.78
VPS26A-207ENST00000490696 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
VPS26A-207ENST00000490696 COPS6Q7L5N1 327 aa19.92■□□□□ 0.78
VPS26A-207ENST00000490696 CNBD1Q8NA66 436 aa19.92■□□□□ 0.78
VPS26A-207ENST00000490696 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
VPS26A-207ENST00000490696 NUP98P52948 1817 aa19.92■□□□□ 0.78
VPS26A-207ENST00000490696 BRCA1P38398 1863 aaKnown RBP19.91■□□□□ 0.78
VPS26A-207ENST00000490696 GRIN3BO60391 1043 aa19.91■□□□□ 0.78
VPS26A-207ENST00000490696 CHRNA5P30532 468 aa19.91■□□□□ 0.78
VPS26A-207ENST00000490696 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
VPS26A-207ENST00000490696 MIER1Q8N108 512 aa19.91■□□□□ 0.78
VPS26A-207ENST00000490696 ZNF521Q96K83 1311 aa19.91■□□□□ 0.78
VPS26A-207ENST00000490696 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
VPS26A-207ENST00000490696 NBPF5PQ86XG9 351 aaPredicted RBP19.9■□□□□ 0.78
VPS26A-207ENST00000490696 CCDC24Q8N4L8 307 aa19.9■□□□□ 0.78
VPS26A-207ENST00000490696 BRIP1Q9BX63 1249 aa19.9■□□□□ 0.78
VPS26A-207ENST00000490696 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
VPS26A-207ENST00000490696 C1QTNF8P60827 252 aa19.89■□□□□ 0.77
VPS26A-207ENST00000490696 AIMP1Q12904 312 aaKnown RBP19.89■□□□□ 0.77
VPS26A-207ENST00000490696 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
VPS26A-207ENST00000490696 ZNF34Q8IZ26 560 aa19.89■□□□□ 0.77
VPS26A-207ENST00000490696 ANKRD31Q8N7Z5 1873 aa19.89■□□□□ 0.77
VPS26A-207ENST00000490696 HYPKQ9NX55 129 aa19.89■□□□□ 0.77
VPS26A-207ENST00000490696 UBN2Q6ZU65 1347 aa19.88■□□□□ 0.77
VPS26A-207ENST00000490696 PIM2Q9P1W9 311 aa19.88■□□□□ 0.77
VPS26A-207ENST00000490696 GPTP24298 496 aa19.87■□□□□ 0.77
VPS26A-207ENST00000490696 ST5P78524 1137 aa19.87■□□□□ 0.77
VPS26A-207ENST00000490696 TPTE2Q6XPS3 522 aa19.87■□□□□ 0.77
VPS26A-207ENST00000490696 CHMP4AQ9BY43 222 aa19.87■□□□□ 0.77
VPS26A-207ENST00000490696 BCS1LQ9Y276 419 aa19.87■□□□□ 0.77
VPS26A-207ENST00000490696 NPHP1O15259 732 aa19.86■□□□□ 0.77
VPS26A-207ENST00000490696 PDE6BP35913 854 aa19.86■□□□□ 0.77
VPS26A-207ENST00000490696 TWISTNBQ3B726 338 aaPredicted RBP19.86■□□□□ 0.77
VPS26A-207ENST00000490696 CCDC30Q5VVM6 783 aa19.86■□□□□ 0.77
VPS26A-207ENST00000490696 C2CD5Q86YS7 1000 aa19.86■□□□□ 0.77
VPS26A-207ENST00000490696 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
VPS26A-207ENST00000490696 FAM177BA6PVY3 158 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 H0YIN7 160 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
VPS26A-207ENST00000490696 PLBD2Q8NHP8 589 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 PDZRN3Q9UPQ7 1066 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
VPS26A-207ENST00000490696 HSP90AB3PQ58FF7 597 aa19.84■□□□□ 0.77
VPS26A-207ENST00000490696 SUSD4Q5VX71 490 aa19.84■□□□□ 0.77
VPS26A-207ENST00000490696 ANKRD13DQ6ZTN6 518 aa19.84■□□□□ 0.77
VPS26A-207ENST00000490696 NYXQ9GZU5 481 aa19.84■□□□□ 0.77
VPS26A-207ENST00000490696 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
VPS26A-207ENST00000490696 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
VPS26A-207ENST00000490696 EXOSC9Q06265 439 aaKnown RBP19.83■□□□□ 0.77
VPS26A-207ENST00000490696 TCIRG1Q13488 830 aa19.83■□□□□ 0.77
VPS26A-207ENST00000490696 PARP10Q53GL7 1025 aa19.83■□□□□ 0.77
VPS26A-207ENST00000490696 COL11A2P13942 1736 aaPredicted RBP19.82■□□□□ 0.76
VPS26A-207ENST00000490696 ARFGEF1Q9Y6D6 1849 aa19.82■□□□□ 0.76
VPS26A-207ENST00000490696 KLRG2A4D1S0 409 aaPredicted RBP19.82■□□□□ 0.76
VPS26A-207ENST00000490696 VAMP4O75379 141 aa19.82■□□□□ 0.76
VPS26A-207ENST00000490696 NTSR2O95665 410 aa19.82■□□□□ 0.76
VPS26A-207ENST00000490696 NUTM1Q86Y26 1132 aa19.82■□□□□ 0.76
VPS26A-207ENST00000490696 ABCC12Q96J65 1359 aa19.82■□□□□ 0.76
VPS26A-207ENST00000490696 ANKRD36CQ5JPF3 1778 aa19.81■□□□□ 0.76
VPS26A-207ENST00000490696 SRGNP10124 158 aa19.81■□□□□ 0.76
VPS26A-207ENST00000490696 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
VPS26A-207ENST00000490696 ERFEQ4G0M1 354 aa19.81■□□□□ 0.76
VPS26A-207ENST00000490696 TTLL6Q8N841 843 aa19.81■□□□□ 0.76
VPS26A-207ENST00000490696 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
VPS26A-207ENST00000490696 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
VPS26A-207ENST00000490696 NLRP10Q86W26 655 aa19.8■□□□□ 0.76
VPS26A-207ENST00000490696 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
VPS26A-207ENST00000490696 ZNF622Q969S3 477 aaKnown RBP eCLIP19.79■□□□□ 0.76
VPS26A-207ENST00000490696 ISCA1Q9BUE6 129 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms