RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
RBM39-236ENST00000490484 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
RBM39-236ENST00000490484 NIP7Q9Y221 180 aaKnown RBP eCLIP13.6□□□□□ -0.23
RBM39-236ENST00000490484 MYL6BP14649 208 aa13.59□□□□□ -0.23
RBM39-236ENST00000490484 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
RBM39-236ENST00000490484 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.231e-14■■□□□ 12.1
RBM39-236ENST00000490484 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
RBM39-236ENST00000490484 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 RGL2O15211 777 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 HLFQ16534 295 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 KIF6Q6ZMV9 814 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 TNRC6CQ9HCJ0 1690 aaKnown RBP13.58□□□□□ -0.24
RBM39-236ENST00000490484 CEP350Q5VT06 3117 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.24
RBM39-236ENST00000490484 SBF1O95248 1867 aa13.57□□□□□ -0.24
RBM39-236ENST00000490484 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
RBM39-236ENST00000490484 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
RBM39-236ENST00000490484 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
RBM39-236ENST00000490484 NUP98P52948 1817 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 KIF3CO14782 793 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
RBM39-236ENST00000490484 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
RBM39-236ENST00000490484 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 LAS1LQ9Y4W2 734 aaKnown RBP13.56□□□□□ -0.24
RBM39-236ENST00000490484 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
RBM39-236ENST00000490484 C21orf2O43822 256 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 SRGNP10124 158 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
RBM39-236ENST00000490484 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 NMRK2Q9NPI5 230 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 ABCC12Q96J65 1359 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
RBM39-236ENST00000490484 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 NFKBIEO00221 500 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 ANXA1P04083 346 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 LMNB1P20700 586 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 GPTP24298 496 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 PRELPP51888 382 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 MASTLQ96GX5 879 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 FER1L6Q2WGJ9 1857 aa13.54□□□□□ -0.24
RBM39-236ENST00000490484 CHL1O00533 1208 aa13.53□□□□□ -0.24
RBM39-236ENST00000490484 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
RBM39-236ENST00000490484 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
RBM39-236ENST00000490484 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
RBM39-236ENST00000490484 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
RBM39-236ENST00000490484 APAF1O14727 1248 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 PDIA6Q15084 440 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
RBM39-236ENST00000490484 IBTKQ9P2D0 1353 aaPredicted RBP13.52□□□□□ -0.25
RBM39-236ENST00000490484 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 CCDC88AQ3V6T2 1871 aa13.52□□□□□ -0.25
RBM39-236ENST00000490484 NPR1P16066 1061 aa13.51□□□□□ -0.25
RBM39-236ENST00000490484 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
RBM39-236ENST00000490484 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
RBM39-236ENST00000490484 ERFEQ4G0M1 354 aa13.5□□□□□ -0.25
RBM39-236ENST00000490484 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
RBM39-236ENST00000490484 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
RBM39-236ENST00000490484 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
RBM39-236ENST00000490484 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
RBM39-236ENST00000490484 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
RBM39-236ENST00000490484 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
RBM39-236ENST00000490484 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
RBM39-236ENST00000490484 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
RBM39-236ENST00000490484 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
RBM39-236ENST00000490484 XAGE3Q8WTP9 111 aa13.49□□□□□ -0.25
RBM39-236ENST00000490484 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
RBM39-236ENST00000490484 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 TOMM70O94826 608 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 NTSR2O95665 410 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 COPS6Q7L5N1 327 aa13.48□□□□□ -0.25
RBM39-236ENST00000490484 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
RBM39-236ENST00000490484 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
RBM39-236ENST00000490484 DICER1Q9UPY3 1922 aaKnown RBP13.48□□□□□ -0.25
RBM39-236ENST00000490484 HOXB7P09629 217 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 HSPA6P17066 643 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
RBM39-236ENST00000490484 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
RBM39-236ENST00000490484 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms