RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CASP7P55210 303 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 RAB33AQ14088 237 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 OSBPL7Q9BZF2 842 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 BCL11AQ9H165 835 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 BCS1LQ9Y276 419 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 NEFLP07196 543 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 LONRF2Q1L5Z9 754 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 TSEN2Q8NCE0 465 aaKnown RBP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 ZFRQ96KR1 1074 aaKnown RBP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 SETDB2Q96T68 719 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 BACH1O14867 736 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 SMTNP53814 917 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 CCSAPQ6IQ19 270 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-208ENST00000490163 GALNT12Q8IXK2 581 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 MAF1Q9H063 256 aa4.31□□□□□ -1.72
UBXN4-208ENST00000490163 ZBTB39O15060 712 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 SIAH2O43255 324 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 PDGFRBP09619 1106 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 NBPF20Q3BBV1 942 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 ZNF511Q8NB15 262 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 RPLP1P05386 114 aaKnown RBP4.3□□□□□ -1.72
UBXN4-208ENST00000490163 PMLP29590 882 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 CBLBQ13191 982 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 NYAP1Q6ZVC0 841 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.3□□□□□ -1.72
UBXN4-208ENST00000490163 TNNI2P48788 182 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 RTN1Q16799 776 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 C11orf91Q3C1V1 193 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 NLRP8Q86W28 1048 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 NUDT12Q9BQG2 462 aa4.3□□□□□ -1.72
UBXN4-208ENST00000490163 BIN2Q9UBW5 565 aaPredicted RBP4.3□□□□□ -1.72
UBXN4-208ENST00000490163 ERBB3P21860 1342 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 GRM5P41594 1212 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 SLC4A3P48751 1232 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 TAF1CQ15572 869 aaPredicted RBP4.29□□□□□ -1.72
UBXN4-208ENST00000490163 ETFBKMTQ8IXQ9 262 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 OR6P1Q8NGX9 317 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 ORAI3Q9BRQ5 295 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 ETNK1Q9HBU6 452 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
UBXN4-208ENST00000490163 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
UBXN4-208ENST00000490163 GPRASP2Q96D09 838 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 APBA2Q99767 749 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 CCSER2Q9H7U1 834 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 ZFYVE28Q9HCC9 887 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
UBXN4-208ENST00000490163 COL4A3BPQ9Y5P4 624 aa4.29□□□□□ -1.72
UBXN4-208ENST00000490163 K7ESF4 209 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 RASGRF1Q13972 1273 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 SV2BQ7L1I2 683 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 SHDQ96IW2 340 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 CHRDQ9H2X0 955 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 IFT57Q9NWB7 429 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 FAM8A1Q9UBU6 413 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 TSR3Q9UJK0 312 aaKnown RBP4.28□□□□□ -1.72
UBXN4-208ENST00000490163 NACADO15069 1562 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 GRIN2CQ14957 1233 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 Q6ZVU0 165 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 PCDHB9Q9Y5E1 797 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
UBXN4-208ENST00000490163 ADH1BP00325 375 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 GRNP28799 593 aaKnown RBP4.28□□□□□ -1.72
UBXN4-208ENST00000490163 GIPRP48546 466 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 GDF10P55107 478 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 C4orf46Q504U0 113 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
UBXN4-208ENST00000490163 KCNK17Q96T54 332 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 ZNF69Q9UC07 566 aa4.28□□□□□ -1.72
UBXN4-208ENST00000490163 THRAP3Q9Y2W1 955 aaKnown RBP4.28□□□□□ -1.72
UBXN4-208ENST00000490163 NOS2P35228 1153 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 RPS26P62854 115 aaKnown RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 GNL2Q13823 731 aaKnown RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 BPHLQ86WA6 291 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 KLF16Q9BXK1 252 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 CHPF2Q9P2E5 772 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 PPM1HQ9ULR3 514 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 FGAP02671 866 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 POU3F2P20265 443 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 VPS72Q15906 364 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 NFE2Q16621 373 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 ZNF394Q53GI3 561 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 LILRB2Q8N423 598 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 C19orf47Q8N9M1 422 aaKnown RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 MARVELD3Q96A59 401 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 GGNBP2Q9H3C7 697 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 PRR36Q9H6K5 1346 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 SNPHO15079 494 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 ATE1O95260 518 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 IL2RAP01589 272 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 VARSP26640 1264 aaKnown RBP4.27□□□□□ -1.73
UBXN4-208ENST00000490163 SCTRP47872 440 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 SH3BP2P78314 561 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 IGBP1P78318 339 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
UBXN4-208ENST00000490163 ZC3H12BQ5HYM0 836 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms