RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 SPAG9O60271 1321 aaKnown RBP7.01□□□□□ -1.29
IFRD1-215ENST00000489994 CCDC18Q5T9S5 1454 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 TPD52L2O43399 206 aaKnown RBP7.01□□□□□ -1.29
IFRD1-215ENST00000489994 SH3BP2P78314 561 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 SKOR1P84550 965 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 Q6ZNB5 142 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 MRGPRX2Q96LB1 330 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 TRIM34Q9BYJ4 488 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 ALG2Q9H553 416 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 TFIP11Q9UBB9 837 aaKnown RBP7.01□□□□□ -1.29
IFRD1-215ENST00000489994 NOP58Q9Y2X3 529 aaKnown RBP7.01□□□□□ -1.29
IFRD1-215ENST00000489994 DEPDC5O75140 1603 aa7.01□□□□□ -1.29
IFRD1-215ENST00000489994 CASKIN1Q8WXD9 1431 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 GPATCH8Q9UKJ3 1502 aaKnown RBP7□□□□□ -1.29
IFRD1-215ENST00000489994 SMARCA5O60264 1052 aaPredicted RBP7□□□□□ -1.29
IFRD1-215ENST00000489994 TOM1O60784 492 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 ERCC3P19447 782 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 CALRP27797 417 aaKnown RBP7□□□□□ -1.29
IFRD1-215ENST00000489994 HNRNPMP52272 730 aaKnown RBP eCLIP7□□□□□ -1.29
IFRD1-215ENST00000489994 LINC01559Q495D7 138 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 GORABQ5T7V8 394 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 NBPF14Q5TI25 921 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 NME8Q8N427 588 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 LRRN4Q8WUT4 740 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 PDCL3Q9H2J4 239 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 IQGAP1P46940 1657 aa7□□□□□ -1.29
IFRD1-215ENST00000489994 TTC24A2A3L6 582 aaPredicted RBP6.99□□□□□ -1.29
IFRD1-215ENST00000489994 SOX11P35716 441 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 SEMA3FQ13275 785 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 PKDCCQ504Y2 493 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 TAF3Q5VWG9 929 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 PNMA1Q8ND90 353 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
IFRD1-215ENST00000489994 GOLIM4O00461 696 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 RALBP1Q15311 655 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 DIEXFQ68CQ4 756 aaKnown RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 GGT6Q6P531 493 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 SNIP1Q8TAD8 396 aaKnown RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 GPKOWQ92917 476 aaPredicted RBP eCLIP6.98□□□□□ -1.292e-7■■□□□ 12.3
IFRD1-215ENST00000489994 TOR4AQ9NXH8 423 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 KIAA1107Q9UPP5 1409 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 RNF17Q9BXT8 1623 aaKnown RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 ZC3H13Q5T200 1668 aaKnown RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 ANP32CO43423 234 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 MARCH6O60337 910 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 DGAT1O75907 488 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 ATG7O95352 703 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 SETDB1Q15047 1291 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 AGERQ15109 404 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 APBB1IPQ7Z5R6 666 aaPredicted RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 RGS17Q9UGC6 210 aaPredicted RBP6.98□□□□□ -1.29
IFRD1-215ENST00000489994 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 MED14O60244 1454 aa6.98□□□□□ -1.29
IFRD1-215ENST00000489994 SYNMO15061 1565 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 PLEKHH2Q8IVE3 1493 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 FAM187AA6NFU0 413 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 GPR37L1O60883 481 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 VARSP26640 1264 aaKnown RBP6.97□□□□□ -1.29
IFRD1-215ENST00000489994 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
IFRD1-215ENST00000489994 NR6A1Q15406 480 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 BPHLQ86WA6 291 aaPredicted RBP6.97□□□□□ -1.29
IFRD1-215ENST00000489994 SDR16C5Q8N3Y7 309 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 PPME1Q9Y570 386 aa6.97□□□□□ -1.29
IFRD1-215ENST00000489994 SETD1AO15047 1707 aaKnown RBP6.97□□□□□ -1.29
IFRD1-215ENST00000489994 LRRC7Q96NW7 1537 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 FYCO1Q9BQS8 1478 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 TNRQ92752 1358 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.29
IFRD1-215ENST00000489994 HDAC1Q13547 482 aaPredicted RBP6.96□□□□□ -1.29
IFRD1-215ENST00000489994 UTP14CQ5TAP6 766 aaKnown RBP6.96□□□□□ -1.29
IFRD1-215ENST00000489994 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 SMAP1Q8IYB5 467 aaPredicted RBP6.96□□□□□ -1.29
IFRD1-215ENST00000489994 UCN2Q96RP3 112 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 TSPAN18Q96SJ8 248 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.29
IFRD1-215ENST00000489994 PZPP20742 1482 aa6.96□□□□□ -1.3
IFRD1-215ENST00000489994 NPHP4O75161 1426 aaPredicted RBP6.96□□□□□ -1.3
IFRD1-215ENST00000489994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.96□□□□□ -1.3
IFRD1-215ENST00000489994 ARMCX6Q7L4S7 300 aa6.96□□□□□ -1.3
IFRD1-215ENST00000489994 SPATA32Q96LK8 384 aa6.96□□□□□ -1.3
IFRD1-215ENST00000489994 MTA3Q9BTC8 594 aa6.96□□□□□ -1.3
IFRD1-215ENST00000489994 YY1AP1Q9H869 796 aa6.96□□□□□ -1.3
IFRD1-215ENST00000489994 UBR1Q8IWV7 1749 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 HMGB1P1B2RPK0 211 aaPredicted RBP6.95□□□□□ -1.3
IFRD1-215ENST00000489994 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 MAFBQ9Y5Q3 323 aaPredicted RBP6.95□□□□□ -1.3
IFRD1-215ENST00000489994 TIAM1Q13009 1591 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 UGGT1Q9NYU2 1555 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 KDM5DQ9BY66 1539 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 FAM135AQ9P2D6 1515 aa6.95□□□□□ -1.3
IFRD1-215ENST00000489994 MBD5Q9P267 1494 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 CCER2I3L3R5 266 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 SIAH2O43255 324 aa6.94□□□□□ -1.3
IFRD1-215ENST00000489994 SSR1P43307 286 aaKnown RBP6.94□□□□□ -1.3
IFRD1-215ENST00000489994 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
IFRD1-215ENST00000489994 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms