RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RASSF7Q02833 373 aa15.69■□□□□ 0.1
SRSF4-204ENST00000489898 PDIA6Q15084 440 aa15.69■□□□□ 0.1
SRSF4-204ENST00000489898 HLFQ16534 295 aa15.69■□□□□ 0.1
SRSF4-204ENST00000489898 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
SRSF4-204ENST00000489898 IBTKQ9P2D0 1353 aaPredicted RBP15.68■□□□□ 0.1
SRSF4-204ENST00000489898 BICDL1Q6ZP65 573 aa15.68■□□□□ 0.1
SRSF4-204ENST00000489898 DUOX1Q9NRD9 1551 aa15.67■□□□□ 0.1
SRSF4-204ENST00000489898 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
SRSF4-204ENST00000489898 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
SRSF4-204ENST00000489898 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
SRSF4-204ENST00000489898 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
SRSF4-204ENST00000489898 ZNF646O15015 1829 aaPredicted RBP15.66■□□□□ 0.1
SRSF4-204ENST00000489898 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
SRSF4-204ENST00000489898 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
SRSF4-204ENST00000489898 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
SRSF4-204ENST00000489898 TTLL7Q6ZT98 887 aa15.66■□□□□ 0.1
SRSF4-204ENST00000489898 SLC51AQ86UW1 340 aa15.66■□□□□ 0.1
SRSF4-204ENST00000489898 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
SRSF4-204ENST00000489898 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
SRSF4-204ENST00000489898 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
SRSF4-204ENST00000489898 CLEC4GQ6UXB4 293 aa15.65■□□□□ 0.1
SRSF4-204ENST00000489898 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
SRSF4-204ENST00000489898 ZNF526Q8TF50 670 aaPredicted RBP15.65■□□□□ 0.1
SRSF4-204ENST00000489898 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
SRSF4-204ENST00000489898 SCN4AP35499 1836 aa15.65■□□□□ 0.1
SRSF4-204ENST00000489898 SRGNP10124 158 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 ARHGAP27Q6ZUM4 889 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 NMRK2Q9NPI5 230 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 ADAMTS8Q9UP79 889 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 ERBB4Q15303 1308 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 MAP3K15Q6ZN16 1313 aa15.64■□□□□ 0.09
SRSF4-204ENST00000489898 MYH3P11055 1940 aa15.63■□□□□ 0.09
SRSF4-204ENST00000489898 RIPK4P57078 832 aa15.63■□□□□ 0.09
SRSF4-204ENST00000489898 CNBD1Q8NA66 436 aa15.63■□□□□ 0.09
SRSF4-204ENST00000489898 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
SRSF4-204ENST00000489898 C7orf43Q8WVR3 580 aa15.63■□□□□ 0.09
SRSF4-204ENST00000489898 GPBP1L1Q9HC44 474 aaPredicted RBP15.63■□□□□ 0.09
SRSF4-204ENST00000489898 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
SRSF4-204ENST00000489898 LTBP3Q9NS15 1303 aa15.62■□□□□ 0.09
SRSF4-204ENST00000489898 CHL1O00533 1208 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 TTLL6Q8N841 843 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 CACNA1FO60840 1977 aa15.61■□□□□ 0.09
SRSF4-204ENST00000489898 PSME4Q14997 1843 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 ANXA1P04083 346 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 ZNF853P0CG23 659 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 CRY2Q49AN0 593 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 RNF181Q9P0P0 153 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
SRSF4-204ENST00000489898 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
SRSF4-204ENST00000489898 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
SRSF4-204ENST00000489898 NTSR2O95665 410 aa15.59■□□□□ 0.09
SRSF4-204ENST00000489898 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
SRSF4-204ENST00000489898 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
SRSF4-204ENST00000489898 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
SRSF4-204ENST00000489898 ZNF34Q8IZ26 560 aa15.59■□□□□ 0.09
SRSF4-204ENST00000489898 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
SRSF4-204ENST00000489898 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
SRSF4-204ENST00000489898 H0YIN7 160 aa15.58■□□□□ 0.08
SRSF4-204ENST00000489898 PDE6BP35913 854 aa15.58■□□□□ 0.08
SRSF4-204ENST00000489898 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
SRSF4-204ENST00000489898 POTECB2RU33 542 aa15.57■□□□□ 0.08
SRSF4-204ENST00000489898 MYL6BP14649 208 aa15.57■□□□□ 0.08
SRSF4-204ENST00000489898 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
SRSF4-204ENST00000489898 ZBTB3Q9H5J0 574 aa15.57■□□□□ 0.08
SRSF4-204ENST00000489898 ZNF652Q9Y2D9 606 aa15.57■□□□□ 0.08
SRSF4-204ENST00000489898 C21orf2O43822 256 aa15.56■□□□□ 0.08
SRSF4-204ENST00000489898 LMNB1P20700 586 aa15.56■□□□□ 0.08
SRSF4-204ENST00000489898 GIGYF2Q6Y7W6 1299 aaKnown RBP15.56■□□□□ 0.08
SRSF4-204ENST00000489898 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
SRSF4-204ENST00000489898 NUTM1Q86Y26 1132 aa15.56■□□□□ 0.08
SRSF4-204ENST00000489898 PDZRN3Q9UPQ7 1066 aa15.56■□□□□ 0.08
SRSF4-204ENST00000489898 ST5P78524 1137 aa15.55■□□□□ 0.08
SRSF4-204ENST00000489898 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
SRSF4-204ENST00000489898 SUSD4Q5VX71 490 aa15.55■□□□□ 0.08
SRSF4-204ENST00000489898 MASTLQ96GX5 879 aa15.55■□□□□ 0.08
SRSF4-204ENST00000489898 SCN9AQ15858 1988 aa15.55■□□□□ 0.08
SRSF4-204ENST00000489898 NEFMP07197 916 aa15.54■□□□□ 0.08
SRSF4-204ENST00000489898 ERFEQ4G0M1 354 aa15.54■□□□□ 0.08
SRSF4-204ENST00000489898 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
SRSF4-204ENST00000489898 HSPA6P17066 643 aa15.53■□□□□ 0.08
SRSF4-204ENST00000489898 GPTP24298 496 aa15.53■□□□□ 0.08
SRSF4-204ENST00000489898 WDR43Q15061 677 aaKnown RBP eCLIP15.53■□□□□ 0.08
SRSF4-204ENST00000489898 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
SRSF4-204ENST00000489898 NGEFQ8N5V2 710 aa15.53■□□□□ 0.08
SRSF4-204ENST00000489898 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.089e-13■■□□□ 12.7
SRSF4-204ENST00000489898 APAF1O14727 1248 aa15.52■□□□□ 0.08
SRSF4-204ENST00000489898 HOXB7P09629 217 aa15.52■□□□□ 0.08
SRSF4-204ENST00000489898 NPR1P16066 1061 aa15.52■□□□□ 0.08
SRSF4-204ENST00000489898 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
SRSF4-204ENST00000489898 CHPF2Q9P2E5 772 aa15.52■□□□□ 0.08
SRSF4-204ENST00000489898 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
SRSF4-204ENST00000489898 TOMM70O94826 608 aa15.51■□□□□ 0.07
SRSF4-204ENST00000489898 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
SRSF4-204ENST00000489898 XAGE3Q8WTP9 111 aa15.51■□□□□ 0.07
SRSF4-204ENST00000489898 CNKSR1Q969H4 720 aa15.51■□□□□ 0.07
SRSF4-204ENST00000489898 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms