RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LILRB5O75023 590 aa6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 PTCD1O75127 700 aaKnown RBP6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 C8orf86Q6ZUL3 223 aa6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 PPARGC1BQ86YN6 1023 aaKnown RBP6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 SNRKQ9NRH2 765 aa6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 PCDHB11Q9Y5F2 797 aa6.35□□□□□ -1.39
DEPDC1-204ENST00000489862 A0A1W2PNR3 127 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 PLA2G4AP47712 749 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 MTMR14Q8NCE2 650 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 BANK1Q8NDB2 785 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 TNFRSF25Q93038 417 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 TIMELESSQ9UNS1 1208 aa6.34□□□□□ -1.39
DEPDC1-204ENST00000489862 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
DEPDC1-204ENST00000489862 ZBBXA8MT70 800 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 GSC2O15499 205 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 FBXO45P0C2W1 286 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 MCCD1P59942 119 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 ZNF592Q92610 1267 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 HCN2Q9UL51 889 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 NEUROD1Q13562 356 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
DEPDC1-204ENST00000489862 GPR37L1O60883 481 aa6.31□□□□□ -1.4
DEPDC1-204ENST00000489862 ATP4AP20648 1035 aa6.31□□□□□ -1.4
DEPDC1-204ENST00000489862 GRIK1P39086 918 aa6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 ADH7P40394 386 aa6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 SAMD5Q5TGI4 173 aa6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 INTS5Q6P9B9 1019 aaKnown RBP6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
DEPDC1-204ENST00000489862 TATP17735 454 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1-204ENST00000489862 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
DEPDC1-204ENST00000489862 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1-204ENST00000489862 NDUFB9Q9Y6M9 179 aa6.29□□□□□ -1.4
DEPDC1-204ENST00000489862 NR1H3Q13133 447 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 ZIC5Q96T25 663 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 SOCS7O14512 581 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 EFSO43281 561 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 MED26O95402 600 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 TLR1Q15399 786 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 ASIC4Q96FT7 647 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
DEPDC1-204ENST00000489862 WNT11O96014 354 aa6.27□□□□□ -1.41
DEPDC1-204ENST00000489862 NOS3P29474 1203 aa6.27□□□□□ -1.41
DEPDC1-204ENST00000489862 STRN4Q9NRL3 753 aa6.27□□□□□ -1.41
DEPDC1-204ENST00000489862 TBC1D2BQ9UPU7 963 aa6.27□□□□□ -1.41
DEPDC1-204ENST00000489862 APBB1O00213 710 aa6.25□□□□□ -1.41
DEPDC1-204ENST00000489862 MEGF10Q96KG7 1140 aa6.25□□□□□ -1.41
DEPDC1-204ENST00000489862 SPINK2P20155 84 aa6.25□□□□□ -1.41
DEPDC1-204ENST00000489862 ZDHHC3Q9NYG2 299 aa6.25□□□□□ -1.41
DEPDC1-204ENST00000489862 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
DEPDC1-204ENST00000489862 DTWD1Q8N5C7 304 aa6.24□□□□□ -1.41
DEPDC1-204ENST00000489862 ZNF330Q9Y3S2 320 aaPredicted RBP6.24□□□□□ -1.41
DEPDC1-204ENST00000489862 TGFB1P01137 390 aa6.23□□□□□ -1.41
DEPDC1-204ENST00000489862 IRF5Q13568 498 aa6.22□□□□□ -1.41
DEPDC1-204ENST00000489862 JPH1Q9HDC5 661 aaPredicted RBP6.22□□□□□ -1.41
DEPDC1-204ENST00000489862 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.41
DEPDC1-204ENST00000489862 BICDL1Q6ZP65 573 aa6.21□□□□□ -1.41
DEPDC1-204ENST00000489862 DMRTC2Q8IXT2 367 aaPredicted RBP6.21□□□□□ -1.41
DEPDC1-204ENST00000489862 GDPD2Q9HCC8 539 aa6.21□□□□□ -1.41
DEPDC1-204ENST00000489862 DBX1A6NMT0 343 aa6.21□□□□□ -1.42
DEPDC1-204ENST00000489862 SPOCD1Q6ZMY3 1216 aa6.21□□□□□ -1.42
DEPDC1-204ENST00000489862 DTX1Q86Y01 620 aa6.21□□□□□ -1.42
DEPDC1-204ENST00000489862 PRM3Q9NNZ6 103 aa6.21□□□□□ -1.42
DEPDC1-204ENST00000489862 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
DEPDC1-204ENST00000489862 ADAMTS4O75173 837 aa6.2□□□□□ -1.42
DEPDC1-204ENST00000489862 VAC14Q08AM6 782 aa6.2□□□□□ -1.42
DEPDC1-204ENST00000489862 FBXO11Q86XK2 927 aa6.2□□□□□ -1.42
DEPDC1-204ENST00000489862 DZIP1LQ8IYY4 767 aaKnown RBP6.2□□□□□ -1.42
DEPDC1-204ENST00000489862 ABL2P42684 1182 aa6.19□□□□□ -1.42
DEPDC1-204ENST00000489862 TSGA10IPQ3SY00 556 aa6.19□□□□□ -1.42
DEPDC1-204ENST00000489862 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
DEPDC1-204ENST00000489862 RAXQ9Y2V3 346 aa6.19□□□□□ -1.42
DEPDC1-204ENST00000489862 MCM6Q14566 821 aa6.18□□□□□ -1.42
DEPDC1-204ENST00000489862 CCDC85AQ96PX6 553 aaPredicted RBP6.18□□□□□ -1.42
DEPDC1-204ENST00000489862 SLC30A3Q99726 388 aa6.18□□□□□ -1.42
DEPDC1-204ENST00000489862 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 EIF4G2P78344 907 aaKnown RBP eCLIP6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 SPEM2Q0P670 501 aa6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 ETNK1Q9HBU6 452 aa6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 NEUROD4Q9HD90 331 aa6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 AKTIPQ9H8T0 292 aa6.17□□□□□ -1.42
DEPDC1-204ENST00000489862 AFF1P51825 1210 aaKnown RBP6.16□□□□□ -1.42
DEPDC1-204ENST00000489862 PHTF2Q8N3S3 785 aa6.16□□□□□ -1.42
DEPDC1-204ENST00000489862 NUDT8Q8WV74 236 aa6.16□□□□□ -1.42
DEPDC1-204ENST00000489862 JUNBP17275 347 aaPredicted RBP6.15□□□□□ -1.42
DEPDC1-204ENST00000489862 STOML1Q9UBI4 398 aa6.15□□□□□ -1.42
DEPDC1-204ENST00000489862 RGS9O75916 674 aaPredicted RBP6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 SLFNL1Q499Z3 407 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 MSL1Q68DK7 614 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 ILDR2Q71H61 639 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 ZDHHC13Q8IUH4 622 aa6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 UBE2OQ9C0C9 1292 aaKnown RBP6.14□□□□□ -1.43
DEPDC1-204ENST00000489862 COG6Q9Y2V7 657 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms