RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 RBM46Q8TBY0 533 aaKnown RBP26.55■■□□□ 1.84
CACFD1-205ENST00000489519 CNKSR1Q969H4 720 aa26.55■■□□□ 1.84
CACFD1-205ENST00000489519 STYK1Q6J9G0 422 aa26.54■■□□□ 1.84
CACFD1-205ENST00000489519 SRGNP10124 158 aa26.53■■□□□ 1.84
CACFD1-205ENST00000489519 APLP1P51693 650 aa26.53■■□□□ 1.84
CACFD1-205ENST00000489519 RRAGCQ9HB90 399 aa26.53■■□□□ 1.84
CACFD1-205ENST00000489519 NFKBIEO00221 500 aa26.52■■□□□ 1.84
CACFD1-205ENST00000489519 C21orf2O43822 256 aa26.52■■□□□ 1.84
CACFD1-205ENST00000489519 TPTE2Q6XPS3 522 aa26.52■■□□□ 1.84
CACFD1-205ENST00000489519 MASTLQ96GX5 879 aa26.52■■□□□ 1.84
CACFD1-205ENST00000489519 PRELPP51888 382 aa26.51■■□□□ 1.83
CACFD1-205ENST00000489519 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
CACFD1-205ENST00000489519 NIP7Q9Y221 180 aaKnown RBP eCLIP26.51■■□□□ 1.83
CACFD1-205ENST00000489519 GLTPD2A6NH11 291 aa26.5■■□□□ 1.83
CACFD1-205ENST00000489519 THUMPD2Q9BTF0 503 aaKnown RBP26.5■■□□□ 1.83
CACFD1-205ENST00000489519 CCDC88AQ3V6T2 1871 aa26.5■■□□□ 1.83
CACFD1-205ENST00000489519 KDM3BQ7LBC6 1761 aa26.5■■□□□ 1.83
CACFD1-205ENST00000489519 COL11A2P13942 1736 aaPredicted RBP26.5■■□□□ 1.83
CACFD1-205ENST00000489519 LAMB4A4D0S4 1761 aa26.49■■□□□ 1.83
CACFD1-205ENST00000489519 FSTL1Q12841 308 aa26.49■■□□□ 1.83
CACFD1-205ENST00000489519 SOGA3Q5TF21 947 aa26.49■■□□□ 1.83
CACFD1-205ENST00000489519 TNRC6CQ9HCJ0 1690 aaKnown RBP26.49■■□□□ 1.83
CACFD1-205ENST00000489519 ZNF219Q9P2Y4 722 aaPredicted RBP26.48■■□□□ 1.83
CACFD1-205ENST00000489519 ERVV-1B6SEH8 477 aa26.47■■□□□ 1.83
CACFD1-205ENST00000489519 DDX10Q13206 875 aaKnown RBP26.47■■□□□ 1.83
CACFD1-205ENST00000489519 PRPF40BQ6NWY9 871 aaKnown RBP26.47■■□□□ 1.83
CACFD1-205ENST00000489519 LTBP3Q9NS15 1303 aa26.46■■□□□ 1.83
CACFD1-205ENST00000489519 KLRG2A4D1S0 409 aaPredicted RBP26.46■■□□□ 1.83
CACFD1-205ENST00000489519 VEGFAP15692 232 aaPredicted RBP26.46■■□□□ 1.83
CACFD1-205ENST00000489519 HLFQ16534 295 aa26.46■■□□□ 1.83
CACFD1-205ENST00000489519 FER1L6Q2WGJ9 1857 aa26.45■■□□□ 1.83
CACFD1-205ENST00000489519 SLX4Q8IY92 1834 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 NPR1P16066 1061 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 RIPK4P57078 832 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 DPY19L2Q6NUT2 758 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 NGEFQ8N5V2 710 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 TAOK3Q9H2K8 898 aa26.45■■□□□ 1.82
CACFD1-205ENST00000489519 RRP7AQ9Y3A4 280 aaKnown RBP26.45■■□□□ 1.82
CACFD1-205ENST00000489519 ERFEQ4G0M1 354 aa26.44■■□□□ 1.82
CACFD1-205ENST00000489519 GTF2E1P29083 439 aaPredicted RBP26.43■■□□□ 1.82
CACFD1-205ENST00000489519 LMOD3Q0VAK6 560 aa26.43■■□□□ 1.82
CACFD1-205ENST00000489519 KIF6Q6ZMV9 814 aa26.43■■□□□ 1.82
CACFD1-205ENST00000489519 BABAM1Q9NWV8 329 aa26.43■■□□□ 1.82
CACFD1-205ENST00000489519 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
CACFD1-205ENST00000489519 ERBB4Q15303 1308 aa26.42■■□□□ 1.82
CACFD1-205ENST00000489519 MAP3K15Q6ZN16 1313 aa26.42■■□□□ 1.82
CACFD1-205ENST00000489519 MYBBP1AQ9BQG0 1328 aaKnown RBP26.42■■□□□ 1.82
CACFD1-205ENST00000489519 FAM177BA6PVY3 158 aa26.42■■□□□ 1.82
CACFD1-205ENST00000489519 NYXQ9GZU5 481 aa26.42■■□□□ 1.82
CACFD1-205ENST00000489519 TIAM2Q8IVF5 1701 aa26.42■■□□□ 1.82
CACFD1-205ENST00000489519 DICER1Q9UPY3 1922 aaKnown RBP26.41■■□□□ 1.82
CACFD1-205ENST00000489519 ARFGEF2Q9Y6D5 1785 aa26.41■■□□□ 1.82
CACFD1-205ENST00000489519 MYL6BP14649 208 aa26.41■■□□□ 1.82
CACFD1-205ENST00000489519 TMPOP42166 694 aaKnown RBP26.41■■□□□ 1.82
CACFD1-205ENST00000489519 SMC1BQ8NDV3 1235 aa26.41■■□□□ 1.82
CACFD1-205ENST00000489519 C7orf43Q8WVR3 580 aa26.4■■□□□ 1.82
CACFD1-205ENST00000489519 CACNA1SQ13698 1873 aa26.4■■□□□ 1.82
CACFD1-205ENST00000489519 TTLL7Q6ZT98 887 aa26.39■■□□□ 1.82
CACFD1-205ENST00000489519 DNAJC5GQ8N7S2 189 aa26.39■■□□□ 1.82
CACFD1-205ENST00000489519 NUP98P52948 1817 aa26.39■■□□□ 1.81
CACFD1-205ENST00000489519 ALDH1B1P30837 517 aa26.38■■□□□ 1.81
CACFD1-205ENST00000489519 CCDC93Q567U6 631 aa26.38■■□□□ 1.81
CACFD1-205ENST00000489519 RTKN2Q8IZC4 609 aa26.35■■□□□ 1.81
CACFD1-205ENST00000489519 ZBTB3Q9H5J0 574 aa26.35■■□□□ 1.81
CACFD1-205ENST00000489519 WDR43Q15061 677 aaKnown RBP eCLIP26.34■■□□□ 1.81
CACFD1-205ENST00000489519 IBTKQ9P2D0 1353 aaPredicted RBP26.33■■□□□ 1.81
CACFD1-205ENST00000489519 POTECB2RU33 542 aa26.33■■□□□ 1.81
CACFD1-205ENST00000489519 EIF2S2P20042 333 aaKnown RBP26.33■■□□□ 1.81
CACFD1-205ENST00000489519 CRY2Q49AN0 593 aa26.33■■□□□ 1.81
CACFD1-205ENST00000489519 GIGYF2Q6Y7W6 1299 aaKnown RBP26.33■■□□□ 1.81
CACFD1-205ENST00000489519 NUTM1Q86Y26 1132 aa26.33■■□□□ 1.81
CACFD1-205ENST00000489519 RUNDC1Q96C34 613 aa26.33■■□□□ 1.81
CACFD1-205ENST00000489519 WDR90Q96KV7 1748 aa26.33■■□□□ 1.81
CACFD1-205ENST00000489519 GPTP24298 496 aa26.32■■□□□ 1.8
CACFD1-205ENST00000489519 FKBP4Q02790 459 aaKnown RBP eCLIP26.32■■□□□ 1.8
CACFD1-205ENST00000489519 NEUROD2Q15784 382 aa26.32■■□□□ 1.8
CACFD1-205ENST00000489519 CCDC146Q8IYE0 955 aa26.32■■□□□ 1.8
CACFD1-205ENST00000489519 ZNF34Q8IZ26 560 aa26.32■■□□□ 1.8
CACFD1-205ENST00000489519 PDIA6Q15084 440 aa26.31■■□□□ 1.8
CACFD1-205ENST00000489519 SUSD4Q5VX71 490 aa26.3■■□□□ 1.8
CACFD1-205ENST00000489519 LRP10Q7Z4F1 713 aa26.3■■□□□ 1.8
CACFD1-205ENST00000489519 PPP1R42Q7Z4L9 355 aa26.3■■□□□ 1.8
CACFD1-205ENST00000489519 UBN2Q6ZU65 1347 aa26.3■■□□□ 1.8
CACFD1-205ENST00000489519 PARP10Q53GL7 1025 aa26.29■■□□□ 1.8
CACFD1-205ENST00000489519 RPGRQ92834 1020 aaKnown RBP26.29■■□□□ 1.8
CACFD1-205ENST00000489519 ABCC12Q96J65 1359 aa26.29■■□□□ 1.8
CACFD1-205ENST00000489519 RIC1Q4ADV7 1423 aa26.29■■□□□ 1.8
CACFD1-205ENST00000489519 CHL1O00533 1208 aa26.28■■□□□ 1.8
CACFD1-205ENST00000489519 DDNO94850 711 aaPredicted RBP26.28■■□□□ 1.8
CACFD1-205ENST00000489519 HOXA10P31260 410 aaPredicted RBP26.28■■□□□ 1.8
CACFD1-205ENST00000489519 CC2D2BQ6DHV5 1058 aa26.28■■□□□ 1.8
CACFD1-205ENST00000489519 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
CACFD1-205ENST00000489519 HTRA3P83110 453 aa26.27■■□□□ 1.8
CACFD1-205ENST00000489519 OLFM4Q6UX06 510 aa26.27■■□□□ 1.8
CACFD1-205ENST00000489519 KLRG1Q96E93 195 aa26.27■■□□□ 1.8
CACFD1-205ENST00000489519 ZNF277Q9NRM2 450 aaPredicted RBP26.27■■□□□ 1.8
CACFD1-205ENST00000489519 TRIM35Q9UPQ4 493 aa26.27■■□□□ 1.8
CACFD1-205ENST00000489519 NTSR2O95665 410 aa26.26■■□□□ 1.79
CACFD1-205ENST00000489519 IQCA1LA6NCM1 817 aa26.25■■□□□ 1.79
CACFD1-205ENST00000489519 PROSER3Q2NL68 480 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms