RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 DPYSL4O14531 572 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
PRDM1-207ENST00000489365 PTCD1O75127 700 aaKnown RBP6.76□□□□□ -1.33
PRDM1-207ENST00000489365 ZPR1O75312 459 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 NEFMP07197 916 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 MMP10P09238 476 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 CC2D1BQ5T0F9 858 aaKnown RBP6.76□□□□□ -1.33
PRDM1-207ENST00000489365 RC3H1Q5TC82 1133 aaKnown RBP6.76□□□□□ -1.33
PRDM1-207ENST00000489365 TTC5Q8N0Z6 440 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 GPBP1L1Q9HC44 474 aaPredicted RBP6.76□□□□□ -1.33
PRDM1-207ENST00000489365 TAF1LQ8IZX4 1826 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 TOGARAM1Q9Y4F4 1720 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
PRDM1-207ENST00000489365 U2SURPO15042 1029 aaKnown RBP6.75□□□□□ -1.33
PRDM1-207ENST00000489365 C1QTNF8P60827 252 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 TGFB2P61812 414 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 ITPK1Q13572 414 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
PRDM1-207ENST00000489365 DOK7Q18PE1 504 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 NUDCQ9Y266 331 aa6.75□□□□□ -1.33
PRDM1-207ENST00000489365 KDRP35968 1356 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 COL24A1Q17RW2 1714 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 NPHP1O15259 732 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 RPS6KA4O75676 772 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 STARD3NLO95772 234 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
PRDM1-207ENST00000489365 IL13P35225 146 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 MAP3K9P80192 1104 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 TEFQ10587 303 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 AEBP1Q8IUX7 1158 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 GAS2L2Q8NHY3 880 aa6.74□□□□□ -1.33
PRDM1-207ENST00000489365 UBR3Q6ZT12 1888 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 HMOX1P09601 288 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 CRKLP46109 303 aaKnown RBP6.73□□□□□ -1.33
PRDM1-207ENST00000489365 NBR1Q14596 966 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 PDIA6Q15084 440 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 RTF1Q92541 710 aaKnown RBP6.73□□□□□ -1.33
PRDM1-207ENST00000489365 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 BCS1LQ9Y276 419 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 PCDHGA4Q9Y5G9 962 aa6.73□□□□□ -1.33
PRDM1-207ENST00000489365 NPC1L1Q9UHC9 1359 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 ZNF831Q5JPB2 1677 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 A0A087WZG4 1122 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
PRDM1-207ENST00000489365 TBC1D12O60347 775 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 FCHSD2O94868 740 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
PRDM1-207ENST00000489365 ZNF526Q8TF50 670 aaPredicted RBP6.72□□□□□ -1.33
PRDM1-207ENST00000489365 TEX13AQ9BXU3 409 aaPredicted RBP6.72□□□□□ -1.33
PRDM1-207ENST00000489365 WWC3Q9ULE0 1092 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 KDM6AO15550 1401 aaPredicted RBP6.72□□□□□ -1.33
PRDM1-207ENST00000489365 ATP10DQ9P241 1426 aa6.72□□□□□ -1.33
PRDM1-207ENST00000489365 GNAT3A8MTJ3 354 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 RIMBP2O15034 1052 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 RNMTO43148 476 aaKnown RBP6.71□□□□□ -1.34
PRDM1-207ENST00000489365 GYS1P13807 737 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 MMRN1Q13201 1228 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 DALRD3Q5D0E6 543 aaKnown RBP6.71□□□□□ -1.34
PRDM1-207ENST00000489365 GPR153Q6NV75 609 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 ZSWIM6Q9HCJ5 1215 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 PIM2Q9P1W9 311 aa6.71□□□□□ -1.34
PRDM1-207ENST00000489365 CICQ96RK0 1608 aaPredicted RBP6.71□□□□□ -1.34
PRDM1-207ENST00000489365 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.34
PRDM1-207ENST00000489365 USP42Q9H9J4 1324 aaKnown RBP6.71□□□□□ -1.34
PRDM1-207ENST00000489365 A0A0G2JLW4 131 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 SEMA3EO15041 775 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 MTHFSDQ2M296 383 aaKnown RBP6.7□□□□□ -1.34
PRDM1-207ENST00000489365 SMIM5Q71RC9 77 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 AMIGO3Q86WK7 504 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 SPNS2Q8IVW8 549 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 DNAJC10Q8IXB1 793 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF710Q8N1W2 664 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 FMNL2Q96PY5 1086 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 PNNQ9H307 717 aaKnown RBP6.7□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
PRDM1-207ENST00000489365 KDM2BQ8NHM5 1336 aa6.7□□□□□ -1.34
PRDM1-207ENST00000489365 C10orf71Q711Q0 1435 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 TESPA1A2RU30 521 aaPredicted RBP6.69□□□□□ -1.34
PRDM1-207ENST00000489365 EVI5O60447 810 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 U2AF1L5P0DN76 240 aaPredicted RBP6.69□□□□□ -1.34
PRDM1-207ENST00000489365 CANXP27824 592 aaKnown RBP6.69□□□□□ -1.34
PRDM1-207ENST00000489365 U2AF1Q01081 240 aaKnown RBP eCLIP6.69□□□□□ -1.34
PRDM1-207ENST00000489365 ARSIQ5FYB1 569 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 USPL1Q5W0Q7 1092 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 ZNF652Q9Y2D9 606 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 C4AP0C0L4 1744 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 SCN11AQ9UI33 1791 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 COL15A1P39059 1388 aa6.69□□□□□ -1.34
PRDM1-207ENST00000489365 PXDNLA1KZ92 1463 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 MRC1P22897 1456 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 COL5A3P25940 1745 aaPredicted RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 BTBD11A6QL63 1104 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 PER1O15534 1290 aaPredicted RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 CYP19A1P11511 503 aaPredicted RBP6.68□□□□□ -1.34
PRDM1-207ENST00000489365 DPEP1P16444 411 aa6.68□□□□□ -1.34
PRDM1-207ENST00000489365 PRKAR2BP31323 418 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms