RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 KIF6Q6ZMV9 814 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 SMIM5Q71RC9 77 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
COL4A5-206ENST00000489230 ZNF428Q96B54 188 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 TBC1D2BQ9UPU7 963 aa16■□□□□ 0.15
COL4A5-206ENST00000489230 CEP350Q5VT06 3117 aa15.99■□□□□ 0.15
COL4A5-206ENST00000489230 MYH14Q7Z406 1995 aaKnown RBP15.99■□□□□ 0.15
COL4A5-206ENST00000489230 VAMP4O75379 141 aa15.99■□□□□ 0.15
COL4A5-206ENST00000489230 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
COL4A5-206ENST00000489230 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
COL4A5-206ENST00000489230 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
COL4A5-206ENST00000489230 HSPA6P17066 643 aa15.98■□□□□ 0.15
COL4A5-206ENST00000489230 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
COL4A5-206ENST00000489230 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
COL4A5-206ENST00000489230 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
COL4A5-206ENST00000489230 ZBED9Q6R2W3 1325 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 COPS6Q7L5N1 327 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
COL4A5-206ENST00000489230 WWC3Q9ULE0 1092 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 ADCY9O60503 1353 aa15.97■□□□□ 0.15
COL4A5-206ENST00000489230 CAMTA2O94983 1202 aa15.96■□□□□ 0.15
COL4A5-206ENST00000489230 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
COL4A5-206ENST00000489230 TM4SF1P30408 202 aa15.96■□□□□ 0.15
COL4A5-206ENST00000489230 FKBP8Q14318 412 aa15.96■□□□□ 0.15
COL4A5-206ENST00000489230 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
COL4A5-206ENST00000489230 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 MMP10P09238 476 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 XAGE3Q8WTP9 111 aa15.95■□□□□ 0.14
COL4A5-206ENST00000489230 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
COL4A5-206ENST00000489230 PROSER3Q2NL68 480 aa15.94■□□□□ 0.14
COL4A5-206ENST00000489230 LRP10Q7Z4F1 713 aa15.94■□□□□ 0.14
COL4A5-206ENST00000489230 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
COL4A5-206ENST00000489230 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
COL4A5-206ENST00000489230 TTLL7Q6ZT98 887 aa15.93■□□□□ 0.14
COL4A5-206ENST00000489230 PLBD2Q8NHP8 589 aa15.93■□□□□ 0.14
COL4A5-206ENST00000489230 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
COL4A5-206ENST00000489230 ANXA1P04083 346 aa15.92■□□□□ 0.14
COL4A5-206ENST00000489230 NFIXQ14938 502 aa15.92■□□□□ 0.14
COL4A5-206ENST00000489230 HLFQ16534 295 aa15.91■□□□□ 0.14
COL4A5-206ENST00000489230 ALDH1L2Q3SY69 923 aa15.91■□□□□ 0.14
COL4A5-206ENST00000489230 TPTE2Q6XPS3 522 aa15.91■□□□□ 0.14
COL4A5-206ENST00000489230 RIC3Q7Z5B4 369 aa15.91■□□□□ 0.14
COL4A5-206ENST00000489230 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
COL4A5-206ENST00000489230 SERPINB2P05120 415 aa15.9■□□□□ 0.14
COL4A5-206ENST00000489230 TCIRG1Q13488 830 aa15.9■□□□□ 0.14
COL4A5-206ENST00000489230 PARP10Q53GL7 1025 aa15.9■□□□□ 0.14
COL4A5-206ENST00000489230 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
COL4A5-206ENST00000489230 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
COL4A5-206ENST00000489230 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL4A5-206ENST00000489230 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
COL4A5-206ENST00000489230 NPHP1O15259 732 aa15.89■□□□□ 0.13
COL4A5-206ENST00000489230 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
COL4A5-206ENST00000489230 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
COL4A5-206ENST00000489230 NYXQ9GZU5 481 aa15.89■□□□□ 0.13
COL4A5-206ENST00000489230 PHAXQ9H814 394 aaKnown RBP15.89■□□□□ 0.13
COL4A5-206ENST00000489230 KIF3CO14782 793 aa15.88■□□□□ 0.13
COL4A5-206ENST00000489230 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
COL4A5-206ENST00000489230 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
COL4A5-206ENST00000489230 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
COL4A5-206ENST00000489230 CARMIL3Q8ND23 1372 aa15.87■□□□□ 0.13
COL4A5-206ENST00000489230 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
COL4A5-206ENST00000489230 GTF2E1P29083 439 aaPredicted RBP15.87■□□□□ 0.13
COL4A5-206ENST00000489230 TGFB2P61812 414 aa15.87■□□□□ 0.13
COL4A5-206ENST00000489230 DDR1Q08345 913 aa15.87■□□□□ 0.13
COL4A5-206ENST00000489230 NEXNQ0ZGT2 675 aa15.87■□□□□ 0.13
COL4A5-206ENST00000489230 FLIIQ13045 1269 aa15.87■□□□□ 0.13
COL4A5-206ENST00000489230 TRIM28Q13263 835 aaKnown RBP15.87■□□□□ 0.13
COL4A5-206ENST00000489230 ST5P78524 1137 aa15.86■□□□□ 0.13
COL4A5-206ENST00000489230 FKBP5Q13451 457 aaPredicted RBP15.86■□□□□ 0.13
COL4A5-206ENST00000489230 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 APLP1P51693 650 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-206ENST00000489230 MRPL50Q8N5N7 158 aaKnown RBP15.85■□□□□ 0.13
COL4A5-206ENST00000489230 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 CNBD1Q8NA66 436 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 METTL22Q9BUU2 404 aaPredicted RBP15.85■□□□□ 0.13
COL4A5-206ENST00000489230 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 BCS1LQ9Y276 419 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
COL4A5-206ENST00000489230 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
COL4A5-206ENST00000489230 PDE6BP35913 854 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 G2E3Q7L622 706 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 UTP14AQ9BVJ6 771 aaKnown RBP15.84■□□□□ 0.13
COL4A5-206ENST00000489230 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 PTPRCP08575 1304 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
COL4A5-206ENST00000489230 IPO8O15397 1037 aaKnown RBP15.83■□□□□ 0.12
COL4A5-206ENST00000489230 GPTP24298 496 aa15.83■□□□□ 0.12
COL4A5-206ENST00000489230 RARSP54136 660 aaKnown RBP15.83■□□□□ 0.12
COL4A5-206ENST00000489230 CCDC191Q8NCU4 936 aa15.83■□□□□ 0.12
COL4A5-206ENST00000489230 ISCA1Q9BUE6 129 aa15.83■□□□□ 0.12
COL4A5-206ENST00000489230 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms