RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SENP3-EIF4A1A0A087X0R7 540 aa30.24■■■□□ 2.43
COL9A3-213ENST00000489045 ST5P78524 1137 aa30.24■■■□□ 2.43
COL9A3-213ENST00000489045 PDZRN3Q9UPQ7 1066 aa30.24■■■□□ 2.43
COL9A3-213ENST00000489045 ARFGEF2Q9Y6D5 1785 aa30.23■■■□□ 2.43
COL9A3-213ENST00000489045 CCDC88AQ3V6T2 1871 aa30.23■■■□□ 2.43
COL9A3-213ENST00000489045 RGL2O15211 777 aa30.23■■■□□ 2.43
COL9A3-213ENST00000489045 NEUROD2Q15784 382 aa30.23■■■□□ 2.43
COL9A3-213ENST00000489045 RUNDC1Q96C34 613 aa30.23■■■□□ 2.43
COL9A3-213ENST00000489045 NBPF5PQ86XG9 351 aaPredicted RBP30.22■■■□□ 2.43
COL9A3-213ENST00000489045 NGEFQ8N5V2 710 aa30.22■■■□□ 2.43
COL9A3-213ENST00000489045 ZNF622Q969S3 477 aaKnown RBP eCLIP30.22■■■□□ 2.43
COL9A3-213ENST00000489045 RNF181Q9P0P0 153 aa30.22■■■□□ 2.43
COL9A3-213ENST00000489045 ADAMTS8Q9UP79 889 aa30.22■■■□□ 2.43
COL9A3-213ENST00000489045 RASSF7Q02833 373 aa30.21■■■□□ 2.43
COL9A3-213ENST00000489045 HLFQ16534 295 aa30.21■■■□□ 2.43
COL9A3-213ENST00000489045 NIP7Q9Y221 180 aaKnown RBP eCLIP30.21■■■□□ 2.43
COL9A3-213ENST00000489045 MYL6BP14649 208 aa30.19■■■□□ 2.42
COL9A3-213ENST00000489045 BABAM1Q9NWV8 329 aa30.19■■■□□ 2.42
COL9A3-213ENST00000489045 SLX4Q8IY92 1834 aa30.18■■■□□ 2.42
COL9A3-213ENST00000489045 KIF3CO14782 793 aa30.18■■■□□ 2.42
COL9A3-213ENST00000489045 ZEB1P37275 1124 aaPredicted RBP30.18■■■□□ 2.42
COL9A3-213ENST00000489045 TIAM2Q8IVF5 1701 aa30.18■■■□□ 2.42
COL9A3-213ENST00000489045 FER1L6Q2WGJ9 1857 aa30.18■■■□□ 2.42
COL9A3-213ENST00000489045 ERBB4Q15303 1308 aa30.17■■■□□ 2.42
COL9A3-213ENST00000489045 KIF6Q6ZMV9 814 aa30.16■■■□□ 2.42
COL9A3-213ENST00000489045 TTLL7Q6ZT98 887 aa30.16■■■□□ 2.42
COL9A3-213ENST00000489045 TRIM35Q9UPQ4 493 aa30.16■■■□□ 2.42
COL9A3-213ENST00000489045 MAP3K15Q6ZN16 1313 aa30.16■■■□□ 2.42
COL9A3-213ENST00000489045 FAM177BA6PVY3 158 aa30.15■■■□□ 2.42
COL9A3-213ENST00000489045 ERVV-1B6SEH8 477 aa30.15■■■□□ 2.42
COL9A3-213ENST00000489045 SRGNP10124 158 aa30.15■■■□□ 2.42
COL9A3-213ENST00000489045 STYK1Q6J9G0 422 aa30.14■■■□□ 2.42
COL9A3-213ENST00000489045 TPTE2Q6XPS3 522 aa30.14■■■□□ 2.42
COL9A3-213ENST00000489045 ZNF219Q9P2Y4 722 aaPredicted RBP30.14■■■□□ 2.42
COL9A3-213ENST00000489045 TNRC6CQ9HCJ0 1690 aaKnown RBP30.14■■■□□ 2.41
COL9A3-213ENST00000489045 NFKBIEO00221 500 aa30.13■■■□□ 2.41
COL9A3-213ENST00000489045 C21orf2O43822 256 aa30.13■■■□□ 2.41
COL9A3-213ENST00000489045 EIF2S2P20042 333 aaKnown RBP30.13■■■□□ 2.41
COL9A3-213ENST00000489045 PRELPP51888 382 aa30.13■■■□□ 2.41
COL9A3-213ENST00000489045 MASTLQ96GX5 879 aa30.13■■■□□ 2.41
COL9A3-213ENST00000489045 NMRK2Q9NPI5 230 aa30.13■■■□□ 2.41
COL9A3-213ENST00000489045 LMNB1P20700 586 aa30.12■■■□□ 2.41
COL9A3-213ENST00000489045 CNKSR1Q969H4 720 aa30.12■■■□□ 2.41
COL9A3-213ENST00000489045 ZBTB3Q9H5J0 574 aa30.12■■■□□ 2.41
COL9A3-213ENST00000489045 DICER1Q9UPY3 1922 aaKnown RBP30.11■■■□□ 2.41
COL9A3-213ENST00000489045 PRPF40BQ6NWY9 871 aaKnown RBP30.1■■■□□ 2.41
COL9A3-213ENST00000489045 LAS1LQ9Y4W2 734 aaKnown RBP30.1■■■□□ 2.41
COL9A3-213ENST00000489045 CHL1O00533 1208 aa30.09■■■□□ 2.41
COL9A3-213ENST00000489045 PDIA6Q15084 440 aa30.09■■■□□ 2.41
COL9A3-213ENST00000489045 LRP10Q7Z4F1 713 aa30.09■■■□□ 2.41
COL9A3-213ENST00000489045 KDM2BQ8NHM5 1336 aa30.08■■■□□ 2.41
COL9A3-213ENST00000489045 ZC3H4Q9UPT8 1303 aaKnown RBP30.08■■■□□ 2.41
COL9A3-213ENST00000489045 ANKRD36CQ5JPF3 1778 aa30.08■■■□□ 2.41
COL9A3-213ENST00000489045 KLRG2A4D1S0 409 aaPredicted RBP30.07■■■□□ 2.4
COL9A3-213ENST00000489045 GTF2E1P29083 439 aaPredicted RBP30.07■■■□□ 2.4
COL9A3-213ENST00000489045 KRT24Q2M2I5 525 aa30.07■■■□□ 2.4
COL9A3-213ENST00000489045 PROSER3Q2NL68 480 aa30.07■■■□□ 2.4
COL9A3-213ENST00000489045 ABCC12Q96J65 1359 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 UBN2Q6ZU65 1347 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 ANXA1P04083 346 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 NPR1P16066 1061 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 GPTP24298 496 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 NECTIN2Q92692 538 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 NYXQ9GZU5 481 aa30.06■■■□□ 2.4
COL9A3-213ENST00000489045 IBTKQ9P2D0 1353 aaPredicted RBP30.04■■■□□ 2.4
COL9A3-213ENST00000489045 GIGYF2Q6Y7W6 1299 aaKnown RBP30.04■■■□□ 2.4
COL9A3-213ENST00000489045 NUTM1Q86Y26 1132 aa30.04■■■□□ 2.4
COL9A3-213ENST00000489045 TOMM70O94826 608 aa30.03■■■□□ 2.4
COL9A3-213ENST00000489045 ZNF34Q8IZ26 560 aa30.03■■■□□ 2.4
COL9A3-213ENST00000489045 APAF1O14727 1248 aa30.02■■■□□ 2.4
COL9A3-213ENST00000489045 ERFEQ4G0M1 354 aa30.02■■■□□ 2.4
COL9A3-213ENST00000489045 SOGA3Q5TF21 947 aa30.02■■■□□ 2.4
COL9A3-213ENST00000489045 LTBP3Q9NS15 1303 aa30.01■■■□□ 2.4
COL9A3-213ENST00000489045 HSPA6P17066 643 aa30.01■■■□□ 2.39
COL9A3-213ENST00000489045 SUSD4Q5VX71 490 aa30.01■■■□□ 2.39
COL9A3-213ENST00000489045 TAOK3Q9H2K8 898 aa30.01■■■□□ 2.39
COL9A3-213ENST00000489045 RIC1Q4ADV7 1423 aa30■■■□□ 2.39
COL9A3-213ENST00000489045 CFAP44Q96MT7 982 aa30■■■□□ 2.39
COL9A3-213ENST00000489045 RRAGCQ9HB90 399 aa30■■■□□ 2.39
COL9A3-213ENST00000489045 C7orf43Q8WVR3 580 aa29.99■■■□□ 2.39
COL9A3-213ENST00000489045 CEP350Q5VT06 3117 aa29.99■■■□□ 2.39
COL9A3-213ENST00000489045 NTSR2O95665 410 aa29.98■■■□□ 2.39
COL9A3-213ENST00000489045 CCDC184Q52MB2 194 aa29.98■■■□□ 2.39
COL9A3-213ENST00000489045 COPS6Q7L5N1 327 aa29.98■■■□□ 2.39
COL9A3-213ENST00000489045 C16orf71Q8IYS4 520 aaPredicted RBP29.98■■■□□ 2.39
COL9A3-213ENST00000489045 XAGE3Q8WTP9 111 aa29.98■■■□□ 2.39
COL9A3-213ENST00000489045 DDX21Q9NR30 783 aaKnown RBP eCLIP29.98■■■□□ 2.39
COL9A3-213ENST00000489045 GLTPD2A6NH11 291 aa29.97■■■□□ 2.39
COL9A3-213ENST00000489045 AIMP1Q12904 312 aaKnown RBP29.97■■■□□ 2.39
COL9A3-213ENST00000489045 CRY2Q49AN0 593 aa29.97■■■□□ 2.39
COL9A3-213ENST00000489045 CCDC93Q567U6 631 aa29.97■■■□□ 2.39
COL9A3-213ENST00000489045 HOXB7P09629 217 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 ALDH1B1P30837 517 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 PARP10Q53GL7 1025 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 HDGFL1Q5TGJ6 251 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 MBIPQ9NS73 344 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 CHPF2Q9P2E5 772 aa29.96■■■□□ 2.39
COL9A3-213ENST00000489045 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.39
COL9A3-213ENST00000489045 PPP1R42Q7Z4L9 355 aa29.95■■■□□ 2.39
COL9A3-213ENST00000489045 RBM46Q8TBY0 533 aaKnown RBP29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 346.3 ms