RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
HDLBP-243ENST00000488923 OVOS2A0A0G2JMS6 1433 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 GCP02774 474 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 HOXB7P09629 217 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 CCT4P50991 539 aaKnown RBP8.3□□□□□ -1.08
HDLBP-243ENST00000488923 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-243ENST00000488923 TYW1BQ6NUM6 668 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 MCM10Q7L590 875 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 KRT28Q7Z3Y7 464 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
HDLBP-243ENST00000488923 ARHGEF25Q86VW2 580 aa8.3□□□□□ -1.08
HDLBP-243ENST00000488923 RPAP2Q8IXW5 612 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-243ENST00000488923 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.3□□□□□ -1.08
HDLBP-243ENST00000488923 NPHP3Q7Z494 1330 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 DLG5Q8TDM6 1919 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 ELL2O00472 640 aaPredicted RBP8.29□□□□□ -1.08
HDLBP-243ENST00000488923 PHF14O94880 888 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 NUCB1Q02818 461 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 AKAP4Q5JQC9 854 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 PRKD2Q9BZL6 878 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
HDLBP-243ENST00000488923 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
HDLBP-243ENST00000488923 ABCC6O95255 1503 aa8.29□□□□□ -1.08
HDLBP-243ENST00000488923 MSH6P52701 1360 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 FOXO3O43524 673 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 HMMRO75330 724 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 BECN1Q14457 450 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
HDLBP-243ENST00000488923 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 CHD1LQ86WJ1 897 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 LRCH3Q96II8 777 aa8.28□□□□□ -1.08
HDLBP-243ENST00000488923 TMEM94Q12767 1356 aa8.27□□□□□ -1.09
HDLBP-243ENST00000488923 CEMIPQ8WUJ3 1361 aa8.27□□□□□ -1.09
HDLBP-243ENST00000488923 C1orf141Q5JVX7 400 aa8.27□□□□□ -1.09
HDLBP-243ENST00000488923 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
HDLBP-243ENST00000488923 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
HDLBP-243ENST00000488923 PXDNLA1KZ92 1463 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 GNAI3P08754 354 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 TEFQ10587 303 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 BMP2KLQ5H9B9 411 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 ANKRD44Q8N8A2 993 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 IL17REQ8NFR9 667 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 ANKRD24Q8TF21 1146 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 LTV1Q96GA3 475 aaPredicted RBP8.26□□□□□ -1.09
HDLBP-243ENST00000488923 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 HDAC5Q9UQL6 1122 aa8.26□□□□□ -1.09
HDLBP-243ENST00000488923 TRIM6-TRIM34B2RNG4 842 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 TULP1O00294 542 aaPredicted RBP8.25□□□□□ -1.09
HDLBP-243ENST00000488923 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 SKAP1Q86WV1 359 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
HDLBP-243ENST00000488923 LTN1O94822 1766 aa8.25□□□□□ -1.09
HDLBP-243ENST00000488923 VIRMAQ69YN4 1812 aaKnown RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 MED1Q15648 1581 aaPredicted RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 RGS12O14924 1447 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 GTPBP6O43824 516 aaPredicted RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 PPP4CP60510 307 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 C6orf132Q5T0Z8 1188 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 ANKRD45Q5TZF3 282 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 ZNF530Q6P9A1 599 aaPredicted RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
HDLBP-243ENST00000488923 DCTPP1Q9H773 170 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
HDLBP-243ENST00000488923 GNAI2P04899 355 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
HDLBP-243ENST00000488923 FLIIQ13045 1269 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
HDLBP-243ENST00000488923 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 EPAS1Q99814 870 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 SPG7Q9UQ90 795 aa8.23□□□□□ -1.09
HDLBP-243ENST00000488923 CPDO75976 1380 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
HDLBP-243ENST00000488923 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
HDLBP-243ENST00000488923 KRT24Q2M2I5 525 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 CEP85Q6P2H3 762 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 SPATA31A3Q5VYP0 1347 aa8.22□□□□□ -1.09
HDLBP-243ENST00000488923 ATP10DQ9P241 1426 aa8.21□□□□□ -1.09
HDLBP-243ENST00000488923 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.09
HDLBP-243ENST00000488923 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
HDLBP-243ENST00000488923 EIF4A1P60842 406 aaKnown RBP8.21□□□□□ -1.1
HDLBP-243ENST00000488923 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
HDLBP-243ENST00000488923 USHBP1Q8N6Y0 703 aa8.21□□□□□ -1.1
HDLBP-243ENST00000488923 MIS18AQ9NYP9 233 aa8.21□□□□□ -1.1
HDLBP-243ENST00000488923 DBF4Q9UBU7 674 aaPredicted RBP8.21□□□□□ -1.1
HDLBP-243ENST00000488923 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
HDLBP-243ENST00000488923 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.1
HDLBP-243ENST00000488923 CDC45O75419 566 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms