RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SPTLC1-207ENST00000488921 BRIP1Q9BX63 1249 aa18.11■□□□□ 0.49
SPTLC1-207ENST00000488921 ERBB4Q15303 1308 aa18.11■□□□□ 0.49
SPTLC1-207ENST00000488921 TTLL6Q8N841 843 aa18.1■□□□□ 0.49
SPTLC1-207ENST00000488921 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
SPTLC1-207ENST00000488921 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
SPTLC1-207ENST00000488921 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SPTLC1-207ENST00000488921 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
SPTLC1-207ENST00000488921 KIF6Q6ZMV9 814 aa18.08■□□□□ 0.48
SPTLC1-207ENST00000488921 NBPF5PQ86XG9 351 aaPredicted RBP18.08■□□□□ 0.48
SPTLC1-207ENST00000488921 CCDC88AQ3V6T2 1871 aa18.07■□□□□ 0.48
SPTLC1-207ENST00000488921 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SPTLC1-207ENST00000488921 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
SPTLC1-207ENST00000488921 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
SPTLC1-207ENST00000488921 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
SPTLC1-207ENST00000488921 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
SPTLC1-207ENST00000488921 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 MAP3K15Q6ZN16 1313 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 MYL6BP14649 208 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 TPTE2Q6XPS3 522 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 ZNF622Q969S3 477 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 TRIM35Q9UPQ4 493 aa18.05■□□□□ 0.48
SPTLC1-207ENST00000488921 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
SPTLC1-207ENST00000488921 CCDC24Q8N4L8 307 aa18.04■□□□□ 0.48
SPTLC1-207ENST00000488921 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
SPTLC1-207ENST00000488921 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
SPTLC1-207ENST00000488921 HLFQ16534 295 aa18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 CNKSR1Q969H4 720 aa18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 IBTKQ9P2D0 1353 aaPredicted RBP18.03■□□□□ 0.48
SPTLC1-207ENST00000488921 SLX4Q8IY92 1834 aa18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 CHL1O00533 1208 aa18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 MASTLQ96GX5 879 aa18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
SPTLC1-207ENST00000488921 SRGNP10124 158 aa18.01■□□□□ 0.47
SPTLC1-207ENST00000488921 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
SPTLC1-207ENST00000488921 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
SPTLC1-207ENST00000488921 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
SPTLC1-207ENST00000488921 HOXB7P09629 217 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 LMNB1P20700 586 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 RASSF7Q02833 373 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 SOGA3Q5TF21 947 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 CFAP44Q96MT7 982 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
SPTLC1-207ENST00000488921 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
SPTLC1-207ENST00000488921 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
SPTLC1-207ENST00000488921 FAM177BA6PVY3 158 aa17.99■□□□□ 0.47
SPTLC1-207ENST00000488921 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 KLRG2A4D1S0 409 aaPredicted RBP17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 APAF1O14727 1248 aa17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 NPR1P16066 1061 aa17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 GIGYF2Q6Y7W6 1299 aaKnown RBP17.98■□□□□ 0.47
SPTLC1-207ENST00000488921 ANP32CO43423 234 aa17.97■□□□□ 0.47
SPTLC1-207ENST00000488921 C21orf2O43822 256 aa17.97■□□□□ 0.47
SPTLC1-207ENST00000488921 PDIA6Q15084 440 aa17.97■□□□□ 0.47
SPTLC1-207ENST00000488921 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
SPTLC1-207ENST00000488921 NFKBIEO00221 500 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 KIF3CO14782 793 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 GPTP24298 496 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 GNAI1P63096 354 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 IFT57Q9NWB7 429 aa17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
SPTLC1-207ENST00000488921 UBN2Q6ZU65 1347 aa17.96■□□□□ 0.46
SPTLC1-207ENST00000488921 LTBP3Q9NS15 1303 aa17.96■□□□□ 0.46
SPTLC1-207ENST00000488921 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 PROSER3Q2NL68 480 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 HSP90AB3PQ58FF7 597 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 HDGFL1Q5TGJ6 251 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 NECTIN2Q92692 538 aa17.95■□□□□ 0.46
SPTLC1-207ENST00000488921 ANXA1P04083 346 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 TAOK3Q9H2K8 898 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
SPTLC1-207ENST00000488921 CCDC93Q567U6 631 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 NUTM1Q86Y26 1132 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 XAGE3Q8WTP9 111 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 CHPF2Q9P2E5 772 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 DBF4Q9UBU7 674 aaPredicted RBP17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 LAMB2P55268 1798 aa17.93■□□□□ 0.46
SPTLC1-207ENST00000488921 TOMM70O94826 608 aa17.92■□□□□ 0.46
SPTLC1-207ENST00000488921 NTSR2O95665 410 aa17.92■□□□□ 0.46
SPTLC1-207ENST00000488921 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
SPTLC1-207ENST00000488921 AIMP1Q12904 312 aaKnown RBP17.92■□□□□ 0.46
SPTLC1-207ENST00000488921 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
SPTLC1-207ENST00000488921 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms