RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 VPS37DQ86XT2 251 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 FLT4P35916 1363 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 SERPINC1P01008 464 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 CEP57L1Q8IYX8 460 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 PDCL2Q8N4E4 241 aa11.58□□□□□ -0.56
ZEB1-206ENST00000488625 MAP3K5Q99683 1374 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 CLIP2Q9UDT6 1046 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 F13A1P00488 732 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 HCLS1P14317 486 aaPredicted RBP11.57□□□□□ -0.56
ZEB1-206ENST00000488625 NECAB1Q8N987 351 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
ZEB1-206ENST00000488625 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
ZEB1-206ENST00000488625 ANTXR1Q9H6X2 564 aa11.57□□□□□ -0.56
ZEB1-206ENST00000488625 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 ZKSCAN5Q9Y2L8 839 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 ANXA1P04083 346 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
ZEB1-206ENST00000488625 AK2P54819 239 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 PRDM10Q9NQV6 1147 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 CCDC57Q2TAC2 916 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 HS1BP3Q53T59 392 aa11.56□□□□□ -0.56
ZEB1-206ENST00000488625 BRMS1Q9HCU9 246 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 FAM135BQ49AJ0 1406 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 NOC3LQ8WTT2 800 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 DDX19AQ9NUU7 478 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 CBX1P83916 185 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 SART3Q15020 963 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 FILIP1Q7Z7B0 1213 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 CTNNA3Q9UI47 895 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 USP19O94966 1318 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 CBFA2T2O43439 604 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 OFD1O75665 1012 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 XBP1P17861 261 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
ZEB1-206ENST00000488625 JMYQ8N9B5 988 aa11.55□□□□□ -0.56
ZEB1-206ENST00000488625 HMGB1P09429 215 aaKnown RBP11.54□□□□□ -0.56
ZEB1-206ENST00000488625 GUCY1B3Q02153 619 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 LMBRD1Q9NUN5 540 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 ZC3H6P61129 1189 aaKnown RBP11.54□□□□□ -0.56
ZEB1-206ENST00000488625 DNM1Q05193 864 aaKnown RBP11.54□□□□□ -0.56
ZEB1-206ENST00000488625 ZSCAN25Q6NSZ9 544 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 CHL1O00533 1208 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 ZNF445P59923 1031 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 EYA1Q99502 592 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
ZEB1-206ENST00000488625 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 CCDC70Q6NSX1 233 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 ANO10Q9NW15 660 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
ZEB1-206ENST00000488625 TTC41PQ6P2S7 1318 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 MARCH6O60337 910 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 NOLC1Q14978 699 aaKnown RBP eCLIP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 NEK1Q96PY6 1258 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 PHAXQ9H814 394 aaKnown RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 ATP7BP35670 1465 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 CDKL5O76039 1030 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
ZEB1-206ENST00000488625 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
ZEB1-206ENST00000488625 CCDC47Q96A33 483 aaKnown RBP11.52□□□□□ -0.56
ZEB1-206ENST00000488625 ARHGEF10O15013 1369 aa11.52□□□□□ -0.56
ZEB1-206ENST00000488625 ABCC3O15438 1527 aa11.52□□□□□ -0.56
ZEB1-206ENST00000488625 STARD3NLO95772 234 aa11.52□□□□□ -0.56
ZEB1-206ENST00000488625 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.56
ZEB1-206ENST00000488625 STX1AQ16623 288 aa11.52□□□□□ -0.56
ZEB1-206ENST00000488625 DACH1Q9UI36 760 aa11.52□□□□□ -0.56
ZEB1-206ENST00000488625 PA2G4Q9UQ80 394 aaKnown RBP11.52□□□□□ -0.56
ZEB1-206ENST00000488625 CTAGE5O15320 804 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
ZEB1-206ENST00000488625 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 TNNT1P13805 278 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
ZEB1-206ENST00000488625 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 KIAA0232Q92628 1395 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 HOXC9P31274 260 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
ZEB1-206ENST00000488625 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
ZEB1-206ENST00000488625 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
ZEB1-206ENST00000488625 PTPN14Q15678 1187 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms