RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 PAFAH1B1P43034 410 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 HAND2P61296 217 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 TRMT1Q9NXH9 659 aaKnown RBP17.7■□□□□ 0.42
PKD1-220ENST00000487932 BIN2Q9UBW5 565 aaPredicted RBP17.7■□□□□ 0.42
PKD1-220ENST00000487932 MX1P20591 662 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 F6X3S4 739 aa17.7■□□□□ 0.42
PKD1-220ENST00000487932 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 PHACTR2O75167 634 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 PICALMQ13492 652 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 YEATS4O95619 227 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 GJC1P36383 396 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 TAOK3Q9H2K8 898 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 SCAPERQ9BY12 1400 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
PKD1-220ENST00000487932 TCP11L1Q9NUJ3 509 aa17.69■□□□□ 0.42
PKD1-220ENST00000487932 ATP5J2-PTCD1G3V325 749 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 ZSCAN12O43309 604 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 ACTN2P35609 894 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 FOXO3O43524 673 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 GOLIM4O00461 696 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 IKBKGQ9Y6K9 419 aa17.68■□□□□ 0.42
PKD1-220ENST00000487932 GLRX3O76003 335 aaKnown RBP17.67■□□□□ 0.42
PKD1-220ENST00000487932 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 RAB3IL1Q8TBN0 382 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 MAP9Q49MG5 647 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 POLR3GO15318 223 aaPredicted RBP17.67■□□□□ 0.42
PKD1-220ENST00000487932 BAG3O95817 575 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 TAF12Q16514 161 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 STXBP4Q6ZWJ1 553 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 MAATS1Q7Z4T9 603 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■■■■ 33.4
PKD1-220ENST00000487932 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
PKD1-220ENST00000487932 PAIP2Q9BPZ3 127 aaKnown RBP17.67■□□□□ 0.42
PKD1-220ENST00000487932 GBP3Q9H0R5 595 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 STX6O43752 255 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 RAB11FIP3O75154 756 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 TBCAO75347 108 aaKnown RBP17.66■□□□□ 0.42
PKD1-220ENST00000487932 AMPD3Q01432 767 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 PDE4BQ07343 736 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 VEZTQ9HBM0 779 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 CLIP2Q9UDT6 1046 aa17.66■□□□□ 0.42
PKD1-220ENST00000487932 MICU3Q86XE3 530 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 ALS2CR12Q96Q35 445 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 SLC26A6Q9BXS9 759 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 LDHAL6AQ6ZMR3 332 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
PKD1-220ENST00000487932 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
PKD1-220ENST00000487932 IQSEC3Q9UPP2 1182 aaPredicted RBP17.65■□□□□ 0.42
PKD1-220ENST00000487932 NDC80O14777 642 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 CCDC175P0C221 793 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
PKD1-220ENST00000487932 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 FSIP1Q8NA03 581 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
PKD1-220ENST00000487932 TMEM110-MUSTN1A8MSY1 372 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 KIF5BP33176 963 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
PKD1-220ENST00000487932 A0A1W2PRG0 241 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 SH3BP5O60239 455 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 POGZQ7Z3K3 1410 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 MRVI1Q9Y6F6 885 aa17.64■□□□□ 0.41
PKD1-220ENST00000487932 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 ATP2C2O75185 946 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 LDHCP07864 332 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 TSPY3P0CV98 308 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 TSPY8P0CW00 308 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 CBX1P83916 185 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 MAP3K2Q9Y2U5 619 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 MFSD6Q6ZSS7 791 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 FAM107BQ9H098 131 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 FGD6Q6ZV73 1430 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
PKD1-220ENST00000487932 LRRC45Q96CN5 670 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 FCHSD2O94868 740 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 PDCL2Q8N4E4 241 aa17.63■□□□□ 0.41
PKD1-220ENST00000487932 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
PKD1-220ENST00000487932 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 HDAC9Q9UKV0 1011 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 TCHPQ9BT92 498 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 TFIP11Q9UBB9 837 aaKnown RBP17.62■□□□□ 0.41
PKD1-220ENST00000487932 UBA7P41226 1012 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
PKD1-220ENST00000487932 MXRA7P84157 204 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms