RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
BRCA1-217ENST00000487825 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-217ENST00000487825 KLRG1Q96E93 195 aa9.04□□□□□ -0.96
BRCA1-217ENST00000487825 M0R2N6 131 aa9.03□□□□□ -0.96
BRCA1-217ENST00000487825 LGR5O75473 907 aa9.03□□□□□ -0.96
BRCA1-217ENST00000487825 SEC13P55735 322 aa9.03□□□□□ -0.96
BRCA1-217ENST00000487825 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-217ENST00000487825 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
BRCA1-217ENST00000487825 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
BRCA1-217ENST00000487825 KHNYNO15037 678 aaKnown RBP9.02□□□□□ -0.97
BRCA1-217ENST00000487825 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
BRCA1-217ENST00000487825 DPYDQ12882 1025 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 PTK7Q13308 1070 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 CDCA8Q53HL2 280 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 NEDD1Q8NHV4 660 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 HINFPQ9BQA5 517 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 HCN4Q9Y3Q4 1203 aa9.02□□□□□ -0.97
BRCA1-217ENST00000487825 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 WIZO95785 1651 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 EML1O00423 815 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 PPP1R12BO60237 982 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-217ENST00000487825 MAPTP10636 758 aaKnown RBP9.01□□□□□ -0.97
BRCA1-217ENST00000487825 RFX1P22670 979 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 TNP2Q05952 138 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 LRRC69Q6ZNQ3 347 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L15C9J2P7 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L10C9JJH3 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L12C9JPN9 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L11C9JVI0 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L21D6R901 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L18D6R9N7 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L22D6RA61 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L19D6RCP7 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L20D6RJB6 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 CD33P20138 364 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 USP17L24Q0WX57 530 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 KCNMA1Q12791 1236 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
BRCA1-217ENST00000487825 SCG3Q8WXD2 468 aaKnown RBP9□□□□□ -0.97
BRCA1-217ENST00000487825 HCN2Q9UL51 889 aa9□□□□□ -0.97
BRCA1-217ENST00000487825 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 KIF13AQ9H1H9 1805 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 OIP5O43482 229 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 C21orf2O43822 256 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 IRS1P35568 1242 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 ANKMY2Q8IV38 441 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 GALNT6Q8NCL4 622 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
BRCA1-217ENST00000487825 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 GSK3AP49840 483 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 C1orf229Q6ZS94 237 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-217ENST00000487825 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 PHACTR1Q9C0D0 580 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 GTF3C3Q9Y5Q9 886 aa8.98□□□□□ -0.97
BRCA1-217ENST00000487825 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-217ENST00000487825 RASSF7Q02833 373 aa8.97□□□□□ -0.97
BRCA1-217ENST00000487825 SCARF2Q96GP6 870 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-217ENST00000487825 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
BRCA1-217ENST00000487825 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-217ENST00000487825 DNMT3AQ9Y6K1 912 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-217ENST00000487825 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
BRCA1-217ENST00000487825 SHISA8B8ZZ34 492 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 SAMD5Q5TGI4 173 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 EDARADDQ8WWZ3 215 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
BRCA1-217ENST00000487825 NEURL1BA8MQ27 555 aa8.95□□□□□ -0.98
BRCA1-217ENST00000487825 HIRAP54198 1017 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-217ENST00000487825 C1orf53Q5VUE5 145 aa8.95□□□□□ -0.98
BRCA1-217ENST00000487825 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-217ENST00000487825 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
BRCA1-217ENST00000487825 MARK1Q9P0L2 795 aa8.95□□□□□ -0.98
BRCA1-217ENST00000487825 TOPBP1Q92547 1522 aa8.95□□□□□ -0.98
BRCA1-217ENST00000487825 GDF11O95390 407 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 POTEAQ6S8J7 498 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 ALDH16A1Q8IZ83 802 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 TMEM151AQ8N4L1 468 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 ARXQ96QS3 562 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
BRCA1-217ENST00000487825 EFSO43281 561 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 ARAFP10398 606 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 AMPD1P23109 780 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 PCBP4P57723 403 aaKnown RBP8.93□□□□□ -0.98
BRCA1-217ENST00000487825 GRIN2CQ14957 1233 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 SLCO4C1Q6ZQN7 724 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 ZNF280CQ8ND82 737 aa8.93□□□□□ -0.98
BRCA1-217ENST00000487825 RRAGCQ9HB90 399 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms