RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SERPINB2P05120 415 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 DDR1Q08345 913 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 DUSP27Q5VZP5 1158 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
LCN2-205ENST00000487719 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 CNBD1Q8NA66 436 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 DBF4Q9UBU7 674 aaPredicted RBP12.09□□□□□ -0.47
LCN2-205ENST00000487719 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 KIAA1551Q9HCM1 1747 aa12.08□□□□□ -0.47
LCN2-205ENST00000487719 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.47
LCN2-205ENST00000487719 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 GTF2E1P29083 439 aaPredicted RBP12.08□□□□□ -0.48
LCN2-205ENST00000487719 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
LCN2-205ENST00000487719 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
LCN2-205ENST00000487719 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
LCN2-205ENST00000487719 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
LCN2-205ENST00000487719 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
LCN2-205ENST00000487719 PDE6BP35913 854 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 ZBTB3Q9H5J0 574 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
LCN2-205ENST00000487719 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
LCN2-205ENST00000487719 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
LCN2-205ENST00000487719 H0YIN7 160 aa12.05□□□□□ -0.48
LCN2-205ENST00000487719 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
LCN2-205ENST00000487719 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
LCN2-205ENST00000487719 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
LCN2-205ENST00000487719 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
LCN2-205ENST00000487719 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 DDX58O95786 925 aaKnown RBP12.04□□□□□ -0.48
LCN2-205ENST00000487719 DPEP1P16444 411 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
LCN2-205ENST00000487719 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
LCN2-205ENST00000487719 TTLL7Q6ZT98 887 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
LCN2-205ENST00000487719 BRIP1Q9BX63 1249 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
LCN2-205ENST00000487719 UTRNP46939 3433 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 ANXA1P04083 346 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 YY1P25490 414 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
LCN2-205ENST00000487719 PRR5LQ6MZQ0 368 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 FANCIQ9NVI1 1328 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 MYH3P11055 1940 aa12.03□□□□□ -0.48
LCN2-205ENST00000487719 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
LCN2-205ENST00000487719 FAM177BA6PVY3 158 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 PDIA6Q15084 440 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 HLFQ16534 295 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 PROSER3Q2NL68 480 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 SBF1O95248 1867 aa12.02□□□□□ -0.49
LCN2-205ENST00000487719 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
LCN2-205ENST00000487719 GPTP24298 496 aa12.01□□□□□ -0.49
LCN2-205ENST00000487719 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
LCN2-205ENST00000487719 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
LCN2-205ENST00000487719 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
LCN2-205ENST00000487719 LAMB2P55268 1798 aa12□□□□□ -0.49
LCN2-205ENST00000487719 E9PSI1 815 aa12□□□□□ -0.49
LCN2-205ENST00000487719 HSP90B1P14625 803 aaKnown RBP12□□□□□ -0.49
LCN2-205ENST00000487719 CHRNA5P30532 468 aa12□□□□□ -0.49
LCN2-205ENST00000487719 CNKSR1Q969H4 720 aa12□□□□□ -0.49
LCN2-205ENST00000487719 UTP14AQ9BVJ6 771 aaKnown RBP12□□□□□ -0.49
LCN2-205ENST00000487719 DICER1Q9UPY3 1922 aaKnown RBP11.99□□□□□ -0.49
LCN2-205ENST00000487719 NEXNQ0ZGT2 675 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 ZNF34Q8IZ26 560 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 MIER1Q8N108 512 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 MASTLQ96GX5 879 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 SLX4Q8IY92 1834 aa11.99□□□□□ -0.49
LCN2-205ENST00000487719 FER1L6Q2WGJ9 1857 aa11.98□□□□□ -0.49
LCN2-205ENST00000487719 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
LCN2-205ENST00000487719 EXOSC9Q06265 439 aaKnown RBP11.98□□□□□ -0.49
LCN2-205ENST00000487719 STYK1Q6J9G0 422 aa11.98□□□□□ -0.49
LCN2-205ENST00000487719 ARHGAP27Q6ZUM4 889 aa11.98□□□□□ -0.49
LCN2-205ENST00000487719 LRP10Q7Z4F1 713 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms