RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 SERPINB2P05120 415 aa12.64□□□□□ -0.39
SATB1-215ENST00000487699 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
SATB1-215ENST00000487699 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
SATB1-215ENST00000487699 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
SATB1-215ENST00000487699 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 ELL2O00472 640 aaPredicted RBP12.63□□□□□ -0.39
SATB1-215ENST00000487699 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
SATB1-215ENST00000487699 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
SATB1-215ENST00000487699 TGFB2P61812 414 aa12.62□□□□□ -0.39
SATB1-215ENST00000487699 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
SATB1-215ENST00000487699 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
SATB1-215ENST00000487699 DPEP1P16444 411 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
SATB1-215ENST00000487699 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
SATB1-215ENST00000487699 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
SATB1-215ENST00000487699 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
SATB1-215ENST00000487699 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
SATB1-215ENST00000487699 VAMP4O75379 141 aa12.59□□□□□ -0.39
SATB1-215ENST00000487699 CHRNA5P30532 468 aa12.59□□□□□ -0.39
SATB1-215ENST00000487699 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
SATB1-215ENST00000487699 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
SATB1-215ENST00000487699 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
SATB1-215ENST00000487699 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
SATB1-215ENST00000487699 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
SATB1-215ENST00000487699 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
SATB1-215ENST00000487699 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
SATB1-215ENST00000487699 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
SATB1-215ENST00000487699 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
SATB1-215ENST00000487699 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
SATB1-215ENST00000487699 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
SATB1-215ENST00000487699 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
SATB1-215ENST00000487699 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
SATB1-215ENST00000487699 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
SATB1-215ENST00000487699 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
SATB1-215ENST00000487699 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
SATB1-215ENST00000487699 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
SATB1-215ENST00000487699 NUP98P52948 1817 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
SATB1-215ENST00000487699 NTSR2O95665 410 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 GPTP24298 496 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 GPR162Q16538 588 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 G2E3Q7L622 706 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 BRCA1P38398 1863 aaKnown RBP12.56□□□□□ -0.4
SATB1-215ENST00000487699 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
SATB1-215ENST00000487699 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
SATB1-215ENST00000487699 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
SATB1-215ENST00000487699 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
SATB1-215ENST00000487699 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
SATB1-215ENST00000487699 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
SATB1-215ENST00000487699 ERFEQ4G0M1 354 aa12.54□□□□□ -0.4
SATB1-215ENST00000487699 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
SATB1-215ENST00000487699 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
SATB1-215ENST00000487699 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
SATB1-215ENST00000487699 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
SATB1-215ENST00000487699 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
SATB1-215ENST00000487699 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 SRGNP10124 158 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
SATB1-215ENST00000487699 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 ADCY9O60503 1353 aa12.53□□□□□ -0.4
SATB1-215ENST00000487699 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
SATB1-215ENST00000487699 E9PSI1 815 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
SATB1-215ENST00000487699 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
SATB1-215ENST00000487699 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
SATB1-215ENST00000487699 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 PDE6BP35913 854 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
SATB1-215ENST00000487699 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 H0YIN7 160 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 PRELPP51888 382 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 ST5P78524 1137 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
SATB1-215ENST00000487699 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
SATB1-215ENST00000487699 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms