RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 C1orf229Q6ZS94 237 aaPredicted RBP9.87□□□□□ -0.83
CUL3-211ENST00000487558 MSTNO14793 375 aa9.86□□□□□ -0.83
CUL3-211ENST00000487558 SNRPNP63162 240 aaKnown RBP9.86□□□□□ -0.83
CUL3-211ENST00000487558 PGBD3Q8N328 593 aa9.86□□□□□ -0.83
CUL3-211ENST00000487558 C1orf216Q8TAB5 229 aa9.86□□□□□ -0.83
CUL3-211ENST00000487558 RHBDD1Q8TEB9 315 aa9.86□□□□□ -0.83
CUL3-211ENST00000487558 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
CUL3-211ENST00000487558 SFI1A8K8P3 1242 aa9.85□□□□□ -0.83
CUL3-211ENST00000487558 C2CD2LO14523 706 aa9.85□□□□□ -0.83
CUL3-211ENST00000487558 GALNT6Q8NCL4 622 aa9.85□□□□□ -0.83
CUL3-211ENST00000487558 SPOCK3Q9BQ16 436 aa9.85□□□□□ -0.83
CUL3-211ENST00000487558 HINFPQ9BQA5 517 aa9.85□□□□□ -0.83
CUL3-211ENST00000487558 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
CUL3-211ENST00000487558 CRISPLD1Q9H336 500 aa9.84□□□□□ -0.83
CUL3-211ENST00000487558 GDF2Q9UK05 429 aaPredicted RBP9.84□□□□□ -0.83
CUL3-211ENST00000487558 M0R2N6 131 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 PRMT3O60678 531 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 PROCP04070 461 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 SCNN1DP51172 638 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 TLR1Q15399 786 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 EFHC2Q5JST6 749 aa9.83□□□□□ -0.84
CUL3-211ENST00000487558 BNIP3LO60238 219 aa9.82□□□□□ -0.84
CUL3-211ENST00000487558 EDARADDQ8WWZ3 215 aa9.82□□□□□ -0.84
CUL3-211ENST00000487558 ABHD17AQ96GS6 310 aa9.82□□□□□ -0.84
CUL3-211ENST00000487558 INHAP05111 366 aa9.81□□□□□ -0.84
CUL3-211ENST00000487558 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
CUL3-211ENST00000487558 CTBSQ01459 385 aa9.81□□□□□ -0.84
CUL3-211ENST00000487558 GOLGA6L1Q8N7Z2 621 aa9.81□□□□□ -0.84
CUL3-211ENST00000487558 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
CUL3-211ENST00000487558 CXXC1Q9P0U4 656 aaPredicted RBP9.81□□□□□ -0.84
CUL3-211ENST00000487558 BMP4P12644 408 aa9.8□□□□□ -0.84
CUL3-211ENST00000487558 OCLNQ16625 522 aa9.8□□□□□ -0.84
CUL3-211ENST00000487558 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
CUL3-211ENST00000487558 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
CUL3-211ENST00000487558 FGFR3P22607 806 aa9.79□□□□□ -0.84
CUL3-211ENST00000487558 GDF10P55107 478 aa9.79□□□□□ -0.84
CUL3-211ENST00000487558 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
CUL3-211ENST00000487558 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
CUL3-211ENST00000487558 KRBA1A5PL33 1030 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 BACH1O14867 736 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 ADAM23O75077 832 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 ATP4AP20648 1035 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 COL8A1P27658 744 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 PLA2G4AP47712 749 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
CUL3-211ENST00000487558 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
CUL3-211ENST00000487558 SERPINB4P48594 390 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 SMTNP53814 917 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 NLRP8Q86W28 1048 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 TSEN2Q8NCE0 465 aaKnown RBP9.77□□□□□ -0.85
CUL3-211ENST00000487558 NIFKQ9BYG3 293 aaKnown RBP9.77□□□□□ -0.85
CUL3-211ENST00000487558 ZCCHC2Q9C0B9 1178 aaKnown RBP9.77□□□□□ -0.85
CUL3-211ENST00000487558 ZNF358Q9NW07 568 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 PCDHGC4Q9Y5F7 938 aa9.77□□□□□ -0.85
CUL3-211ENST00000487558 WEE1P30291 646 aa9.76□□□□□ -0.85
CUL3-211ENST00000487558 FIGNL1Q6PIW4 674 aa9.76□□□□□ -0.85
CUL3-211ENST00000487558 ALYREFQ86V81 257 aaKnown RBP9.76□□□□□ -0.85
CUL3-211ENST00000487558 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
CUL3-211ENST00000487558 RRAGCQ9HB90 399 aa9.76□□□□□ -0.85
CUL3-211ENST00000487558 HCN2Q9UL51 889 aa9.76□□□□□ -0.85
CUL3-211ENST00000487558 PTCD1O75127 700 aaKnown RBP9.75□□□□□ -0.85
CUL3-211ENST00000487558 ARAFP10398 606 aa9.75□□□□□ -0.85
CUL3-211ENST00000487558 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
CUL3-211ENST00000487558 IQSEC3Q9UPP2 1182 aaPredicted RBP9.75□□□□□ -0.85
CUL3-211ENST00000487558 TMEM229AB2RXF0 380 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 ABL1P00519 1130 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 EPXP11678 715 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 ERCC3P19447 782 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 SCNN1AP37088 669 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 BTBD6Q96KE9 485 aa9.74□□□□□ -0.85
CUL3-211ENST00000487558 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
CUL3-211ENST00000487558 CDK2AP1O14519 115 aa9.73□□□□□ -0.85
CUL3-211ENST00000487558 LGR5O75473 907 aa9.73□□□□□ -0.85
CUL3-211ENST00000487558 MTFR1Q15390 333 aa9.73□□□□□ -0.85
CUL3-211ENST00000487558 ATXN7O15265 892 aaPredicted RBP9.72□□□□□ -0.85
CUL3-211ENST00000487558 IGFBP4P22692 258 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 RBM25P49756 843 aaKnown RBP9.72□□□□□ -0.85
CUL3-211ENST00000487558 TNP2Q05952 138 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 AIDAQ96BJ3 306 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 SUV39H2Q9H5I1 410 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 SERTAD1Q9UHV2 236 aa9.72□□□□□ -0.85
CUL3-211ENST00000487558 A0A1W2PNR3 127 aa9.71□□□□□ -0.86
CUL3-211ENST00000487558 AMPD1P23109 780 aa9.71□□□□□ -0.86
CUL3-211ENST00000487558 COL26A1Q96A83 441 aa9.71□□□□□ -0.86
CUL3-211ENST00000487558 KLF15Q9UIH9 416 aa9.71□□□□□ -0.86
CUL3-211ENST00000487558 USP3Q9Y6I4 520 aa9.71□□□□□ -0.86
CUL3-211ENST00000487558 A6NJY4 79 aa9.7□□□□□ -0.86
CUL3-211ENST00000487558 NEURL1BA8MQ27 555 aa9.7□□□□□ -0.86
CUL3-211ENST00000487558 FOXO3O43524 673 aa9.7□□□□□ -0.86
CUL3-211ENST00000487558 MAPTP10636 758 aaKnown RBP9.7□□□□□ -0.86
CUL3-211ENST00000487558 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
CUL3-211ENST00000487558 GTF3C2Q8WUA4 911 aaPredicted RBP9.7□□□□□ -0.86
CUL3-211ENST00000487558 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
CUL3-211ENST00000487558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
CUL3-211ENST00000487558 ICMTO60725 284 aa9.69□□□□□ -0.86
CUL3-211ENST00000487558 BAG6P46379 1132 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms