RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 RHOQP17081 205 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 TMC7Q7Z402 723 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 RHPN1Q8TCX5 695 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 ZDHHC3Q9NYG2 299 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
PRPF38A-203ENST00000487160 GFRA3O60609 400 aa8.37□□□□□ -1.07
PRPF38A-203ENST00000487160 TATP17735 454 aaPredicted RBP8.37□□□□□ -1.07
PRPF38A-203ENST00000487160 PKDCCQ504Y2 493 aa8.37□□□□□ -1.07
PRPF38A-203ENST00000487160 TREML1Q86YW5 311 aa8.37□□□□□ -1.07
PRPF38A-203ENST00000487160 TMC1Q8TDI8 760 aa8.37□□□□□ -1.07
PRPF38A-203ENST00000487160 SOS2Q07890 1332 aaPredicted RBP8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 UNCXA6NJT0 531 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 E9PSI1 815 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 DGAT1O75907 488 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 ZAP70P43403 619 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 CTC1Q2NKJ3 1217 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 BICDL1Q6ZP65 573 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
PRPF38A-203ENST00000487160 AXIN1O15169 862 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 ZNF16P17020 682 aaPredicted RBP8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 DNM1Q05193 864 aaKnown RBP8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 EDEM1Q92611 657 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 SUSD3Q96L08 255 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 ZFP42Q96MM3 310 aa8.35□□□□□ -1.07
PRPF38A-203ENST00000487160 MICAL2O94851 1124 aa8.34□□□□□ -1.07
PRPF38A-203ENST00000487160 ATP4AP20648 1035 aa8.34□□□□□ -1.07
PRPF38A-203ENST00000487160 MSX1P28360 303 aa8.34□□□□□ -1.07
PRPF38A-203ENST00000487160 MZF1P28698 734 aaPredicted RBP8.34□□□□□ -1.07
PRPF38A-203ENST00000487160 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
PRPF38A-203ENST00000487160 TGFBR3LH3BV60 316 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 PDGFAP04085 211 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 HIF1AQ16665 826 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 ARSJQ5FYB0 599 aaPredicted RBP8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 FBXO33Q7Z6M2 555 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
PRPF38A-203ENST00000487160 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 TREHO43280 583 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 PDE3BQ13370 1112 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 DSC3Q14574 896 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 LRRC69Q6ZNQ3 347 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 ANKIB1Q9P2G1 1089 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 DNMT3LQ9UJW3 386 aa8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 GPC6Q9Y625 555 aaPredicted RBP8.32□□□□□ -1.08
PRPF38A-203ENST00000487160 OPLAHO14841 1288 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 GPR182O15218 404 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 IGHA2P01877 340 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 CRIPAKQ8N1N5 446 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 DMRTB1Q96MA1 342 aa8.31□□□□□ -1.08
PRPF38A-203ENST00000487160 A0A1W2PNR3 127 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 USP5P45974 858 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 IDH3AP50213 366 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 IER5Q5VY09 327 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 GJD3Q8N144 294 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 NUDT16Q96DE0 195 aaKnown RBP8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 GPAMQ9HCL2 828 aa8.3□□□□□ -1.08
PRPF38A-203ENST00000487160 ST8SIA5O15466 376 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 PCSK2P16519 638 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 EHHADHQ08426 723 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 BTLAQ7Z6A9 289 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 MRRFQ96E11 262 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 ATP13A2Q9NQ11 1180 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 KIAA1522Q9P206 1035 aaPredicted RBP8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
PRPF38A-203ENST00000487160 MAPK8P45983 427 aa8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 C8orf34Q49A92 452 aa8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 PIK3R5Q8WYR1 880 aa8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
PRPF38A-203ENST00000487160 A6NHS1 94 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 SOBPA7XYQ1 873 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 MAN1A2O60476 641 aa8.27□□□□□ -1.09
PRPF38A-203ENST00000487160 F11P03951 625 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms