RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ZNF330Q9Y3S2 320 aaPredicted RBP19.02■□□□□ 0.64
CLDN11-207ENST00000486975 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
CLDN11-207ENST00000486975 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-207ENST00000486975 DALRD3Q5D0E6 543 aaKnown RBP19.01■□□□□ 0.63
CLDN11-207ENST00000486975 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
CLDN11-207ENST00000486975 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
CLDN11-207ENST00000486975 ARFGEF1Q9Y6D6 1849 aa19.01■□□□□ 0.63
CLDN11-207ENST00000486975 BCORQ6W2J9 1755 aa19.01■□□□□ 0.63
CLDN11-207ENST00000486975 CHRNA5P30532 468 aa19■□□□□ 0.63
CLDN11-207ENST00000486975 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
CLDN11-207ENST00000486975 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
CLDN11-207ENST00000486975 LAMB4A4D0S4 1761 aa19■□□□□ 0.63
CLDN11-207ENST00000486975 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
CLDN11-207ENST00000486975 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
CLDN11-207ENST00000486975 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
CLDN11-207ENST00000486975 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
CLDN11-207ENST00000486975 CLEC4GQ6UXB4 293 aa18.99■□□□□ 0.63
CLDN11-207ENST00000486975 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
CLDN11-207ENST00000486975 THUMPD2Q9BTF0 503 aaKnown RBP18.99■□□□□ 0.63
CLDN11-207ENST00000486975 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
CLDN11-207ENST00000486975 TMPOP42166 694 aaKnown RBP18.98■□□□□ 0.63
CLDN11-207ENST00000486975 RIPK4P57078 832 aa18.98■□□□□ 0.63
CLDN11-207ENST00000486975 BICDL1Q6ZP65 573 aa18.98■□□□□ 0.63
CLDN11-207ENST00000486975 BABAM1Q9NWV8 329 aa18.98■□□□□ 0.63
CLDN11-207ENST00000486975 PDZRN3Q9UPQ7 1066 aa18.98■□□□□ 0.63
CLDN11-207ENST00000486975 DLEC1Q9Y238 1755 aa18.97■□□□□ 0.63
CLDN11-207ENST00000486975 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-207ENST00000486975 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
CLDN11-207ENST00000486975 FARP1Q9Y4F1 1045 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-207ENST00000486975 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
CLDN11-207ENST00000486975 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLDN11-207ENST00000486975 PRR5LQ6MZQ0 368 aa18.96■□□□□ 0.63
CLDN11-207ENST00000486975 ARHGAP27Q6ZUM4 889 aa18.96■□□□□ 0.63
CLDN11-207ENST00000486975 SETDB2Q96T68 719 aa18.96■□□□□ 0.63
CLDN11-207ENST00000486975 BRIP1Q9BX63 1249 aa18.96■□□□□ 0.63
CLDN11-207ENST00000486975 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
CLDN11-207ENST00000486975 GPBP1L1Q9HC44 474 aaPredicted RBP18.95■□□□□ 0.62
CLDN11-207ENST00000486975 H0YIN7 160 aa18.94■□□□□ 0.62
CLDN11-207ENST00000486975 PDE6BP35913 854 aa18.94■□□□□ 0.62
CLDN11-207ENST00000486975 C2CD5Q86YS7 1000 aa18.94■□□□□ 0.62
CLDN11-207ENST00000486975 CNBD1Q8NA66 436 aa18.94■□□□□ 0.62
CLDN11-207ENST00000486975 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
CLDN11-207ENST00000486975 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
CLDN11-207ENST00000486975 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
CLDN11-207ENST00000486975 TTLL6Q8N841 843 aa18.92■□□□□ 0.62
CLDN11-207ENST00000486975 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
CLDN11-207ENST00000486975 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
CLDN11-207ENST00000486975 ST5P78524 1137 aa18.9■□□□□ 0.62
CLDN11-207ENST00000486975 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
CLDN11-207ENST00000486975 C9orf131Q5VYM1 1079 aa18.89■□□□□ 0.61
CLDN11-207ENST00000486975 NBPF5PQ86XG9 351 aaPredicted RBP18.89■□□□□ 0.61
CLDN11-207ENST00000486975 CREBZFQ9NS37 354 aa18.89■□□□□ 0.61
CLDN11-207ENST00000486975 TRIM35Q9UPQ4 493 aa18.89■□□□□ 0.61
CLDN11-207ENST00000486975 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
CLDN11-207ENST00000486975 CHL1O00533 1208 aa18.88■□□□□ 0.61
CLDN11-207ENST00000486975 NIP7Q9Y221 180 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLDN11-207ENST00000486975 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
CLDN11-207ENST00000486975 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
CLDN11-207ENST00000486975 KLRG2A4D1S0 409 aaPredicted RBP18.87■□□□□ 0.61
CLDN11-207ENST00000486975 NPHP1O15259 732 aa18.87■□□□□ 0.61
CLDN11-207ENST00000486975 HLFQ16534 295 aa18.87■□□□□ 0.61
CLDN11-207ENST00000486975 STYK1Q6J9G0 422 aa18.87■□□□□ 0.61
CLDN11-207ENST00000486975 TPTE2Q6XPS3 522 aa18.87■□□□□ 0.61
CLDN11-207ENST00000486975 ZNF526Q8TF50 670 aaPredicted RBP18.87■□□□□ 0.61
CLDN11-207ENST00000486975 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
CLDN11-207ENST00000486975 SRGNP10124 158 aa18.86■□□□□ 0.61
CLDN11-207ENST00000486975 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
CLDN11-207ENST00000486975 KIF6Q6ZMV9 814 aa18.86■□□□□ 0.61
CLDN11-207ENST00000486975 LRP10Q7Z4F1 713 aa18.86■□□□□ 0.61
CLDN11-207ENST00000486975 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
CLDN11-207ENST00000486975 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
CLDN11-207ENST00000486975 PDIA6Q15084 440 aa18.85■□□□□ 0.61
CLDN11-207ENST00000486975 TTLL7Q6ZT98 887 aa18.85■□□□□ 0.61
CLDN11-207ENST00000486975 CNKSR1Q969H4 720 aa18.85■□□□□ 0.61
CLDN11-207ENST00000486975 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLDN11-207ENST00000486975 RNF181Q9P0P0 153 aa18.85■□□□□ 0.61
CLDN11-207ENST00000486975 KIF3CO14782 793 aa18.84■□□□□ 0.61
CLDN11-207ENST00000486975 MYL6BP14649 208 aa18.84■□□□□ 0.61
CLDN11-207ENST00000486975 LMNB1P20700 586 aa18.84■□□□□ 0.61
CLDN11-207ENST00000486975 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
CLDN11-207ENST00000486975 NFKBIEO00221 500 aa18.83■□□□□ 0.6
CLDN11-207ENST00000486975 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.6
CLDN11-207ENST00000486975 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
CLDN11-207ENST00000486975 SBF1O95248 1867 aa18.83■□□□□ 0.6
CLDN11-207ENST00000486975 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.6
CLDN11-207ENST00000486975 HOXB7P09629 217 aa18.82■□□□□ 0.6
CLDN11-207ENST00000486975 NPR1P16066 1061 aa18.82■□□□□ 0.6
CLDN11-207ENST00000486975 RASSF7Q02833 373 aa18.82■□□□□ 0.6
CLDN11-207ENST00000486975 GIGYF2Q6Y7W6 1299 aaKnown RBP18.82■□□□□ 0.6
CLDN11-207ENST00000486975 NYXQ9GZU5 481 aa18.82■□□□□ 0.6
CLDN11-207ENST00000486975 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 EIF2S2P20042 333 aaKnown RBP18.81■□□□□ 0.6
CLDN11-207ENST00000486975 SOGA3Q5TF21 947 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
CLDN11-207ENST00000486975 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 NUP98P52948 1817 aa18.81■□□□□ 0.6
CLDN11-207ENST00000486975 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
CLDN11-207ENST00000486975 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms