RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
SEMA4D-219ENST00000486935 RRP7AQ9Y3A4 280 aaKnown RBP20.18■□□□□ 0.82
SEMA4D-219ENST00000486935 NRXN2Q9P2S2 1712 aa20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 TMPOP42166 694 aaKnown RBP20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 RASSF7Q02833 373 aa20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 RUNDC1Q96C34 613 aa20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
SEMA4D-219ENST00000486935 BRCA1P38398 1863 aaKnown RBP20.16■□□□□ 0.82
SEMA4D-219ENST00000486935 NEUROD2Q15784 382 aa20.16■□□□□ 0.82
SEMA4D-219ENST00000486935 HLFQ16534 295 aa20.16■□□□□ 0.82
SEMA4D-219ENST00000486935 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
SEMA4D-219ENST00000486935 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
SEMA4D-219ENST00000486935 MYL6BP14649 208 aa20.15■□□□□ 0.82
SEMA4D-219ENST00000486935 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEMA4D-219ENST00000486935 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
SEMA4D-219ENST00000486935 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
SEMA4D-219ENST00000486935 C21orf2O43822 256 aa20.14■□□□□ 0.81
SEMA4D-219ENST00000486935 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
SEMA4D-219ENST00000486935 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
SEMA4D-219ENST00000486935 APAF1O14727 1248 aa20.13■□□□□ 0.81
SEMA4D-219ENST00000486935 LMNB1P20700 586 aa20.13■□□□□ 0.81
SEMA4D-219ENST00000486935 ARFGEF1Q9Y6D6 1849 aa20.13■□□□□ 0.81
SEMA4D-219ENST00000486935 RGL2O15211 777 aa20.12■□□□□ 0.81
SEMA4D-219ENST00000486935 SRGNP10124 158 aa20.12■□□□□ 0.81
SEMA4D-219ENST00000486935 STYK1Q6J9G0 422 aa20.12■□□□□ 0.81
SEMA4D-219ENST00000486935 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
SEMA4D-219ENST00000486935 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 GTF2E1P29083 439 aaPredicted RBP20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 PRELPP51888 382 aa20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
SEMA4D-219ENST00000486935 ERVV-1B6SEH8 477 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 NFKBIEO00221 500 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 TOMM70O94826 608 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 HSPA6P17066 643 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 RRAGCQ9HB90 399 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
SEMA4D-219ENST00000486935 MAP3K15Q6ZN16 1313 aa20.09■□□□□ 0.81
SEMA4D-219ENST00000486935 C16orf71Q8IYS4 520 aaPredicted RBP20.09■□□□□ 0.81
SEMA4D-219ENST00000486935 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
SEMA4D-219ENST00000486935 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
SEMA4D-219ENST00000486935 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
SEMA4D-219ENST00000486935 NPR1P16066 1061 aa20.07■□□□□ 0.8
SEMA4D-219ENST00000486935 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
SEMA4D-219ENST00000486935 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 KLRG2A4D1S0 409 aaPredicted RBP20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 GPTP24298 496 aa20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 NYXQ9GZU5 481 aa20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
SEMA4D-219ENST00000486935 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
SEMA4D-219ENST00000486935 ZC3H4Q9UPT8 1303 aaKnown RBP20.05■□□□□ 0.8
SEMA4D-219ENST00000486935 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
SEMA4D-219ENST00000486935 CHL1O00533 1208 aa20.05■□□□□ 0.8
SEMA4D-219ENST00000486935 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
SEMA4D-219ENST00000486935 GLTPD2A6NH11 291 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 ANXA1P04083 346 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 PDIA6Q15084 440 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 PROSER3Q2NL68 480 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 ERFEQ4G0M1 354 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 SOGA3Q5TF21 947 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 TAOK3Q9H2K8 898 aa20.04■□□□□ 0.8
SEMA4D-219ENST00000486935 DLEC1Q9Y238 1755 aa20.03■□□□□ 0.8
SEMA4D-219ENST00000486935 SUSD4Q5VX71 490 aa20.03■□□□□ 0.8
SEMA4D-219ENST00000486935 CEP350Q5VT06 3117 aa20.03■□□□□ 0.8
SEMA4D-219ENST00000486935 KRT24Q2M2I5 525 aa20.02■□□□□ 0.8
SEMA4D-219ENST00000486935 GIGYF2Q6Y7W6 1299 aaKnown RBP20.02■□□□□ 0.8
SEMA4D-219ENST00000486935 ZNF34Q8IZ26 560 aa20.02■□□□□ 0.8
SEMA4D-219ENST00000486935 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
SEMA4D-219ENST00000486935 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
SEMA4D-219ENST00000486935 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.79
SEMA4D-219ENST00000486935 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.79
SEMA4D-219ENST00000486935 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
SEMA4D-219ENST00000486935 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
SEMA4D-219ENST00000486935 DPY19L2Q6NUT2 758 aa20.01■□□□□ 0.79
SEMA4D-219ENST00000486935 LRP10Q7Z4F1 713 aa20.01■□□□□ 0.79
SEMA4D-219ENST00000486935 COL11A2P13942 1736 aaPredicted RBP20■□□□□ 0.79
SEMA4D-219ENST00000486935 VEGFAP15692 232 aaPredicted RBP20■□□□□ 0.79
SEMA4D-219ENST00000486935 ALDH1B1P30837 517 aa20■□□□□ 0.79
SEMA4D-219ENST00000486935 CCDC93Q567U6 631 aa20■□□□□ 0.79
SEMA4D-219ENST00000486935 COPS6Q7L5N1 327 aa20■□□□□ 0.79
SEMA4D-219ENST00000486935 LTBP3Q9NS15 1303 aa20■□□□□ 0.79
SEMA4D-219ENST00000486935 OLFM4Q6UX06 510 aa19.99■□□□□ 0.79
SEMA4D-219ENST00000486935 PPP1R42Q7Z4L9 355 aa19.99■□□□□ 0.79
SEMA4D-219ENST00000486935 XAGE3Q8WTP9 111 aa19.99■□□□□ 0.79
SEMA4D-219ENST00000486935 SBF1O95248 1867 aa19.99■□□□□ 0.79
SEMA4D-219ENST00000486935 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
SEMA4D-219ENST00000486935 APLP1P51693 650 aa19.98■□□□□ 0.79
SEMA4D-219ENST00000486935 RPGRQ92834 1020 aaKnown RBP19.98■□□□□ 0.79
SEMA4D-219ENST00000486935 FSTL1Q12841 308 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 PARP10Q53GL7 1025 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
SEMA4D-219ENST00000486935 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms