RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
SF1-216ENST00000486867 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
SF1-216ENST00000486867 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
SF1-216ENST00000486867 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
SF1-216ENST00000486867 HDGFL1Q5TGJ6 251 aa17.07■□□□□ 0.32
SF1-216ENST00000486867 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
SF1-216ENST00000486867 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
SF1-216ENST00000486867 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
SF1-216ENST00000486867 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
SF1-216ENST00000486867 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
SF1-216ENST00000486867 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
SF1-216ENST00000486867 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
SF1-216ENST00000486867 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
SF1-216ENST00000486867 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
SF1-216ENST00000486867 ZNF652Q9Y2D9 606 aa17.06■□□□□ 0.32
SF1-216ENST00000486867 COL11A2P13942 1736 aaPredicted RBP17.05■□□□□ 0.32
SF1-216ENST00000486867 MYL6BP14649 208 aa17.05■□□□□ 0.32
SF1-216ENST00000486867 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
SF1-216ENST00000486867 SERPINB2P05120 415 aa17.04■□□□□ 0.32
SF1-216ENST00000486867 TGFB2P61812 414 aa17.04■□□□□ 0.32
SF1-216ENST00000486867 HLFQ16534 295 aa17.04■□□□□ 0.32
SF1-216ENST00000486867 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
SF1-216ENST00000486867 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
SF1-216ENST00000486867 ANXA1P04083 346 aa17.03■□□□□ 0.32
SF1-216ENST00000486867 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
SF1-216ENST00000486867 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
SF1-216ENST00000486867 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
SF1-216ENST00000486867 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
SF1-216ENST00000486867 SETDB2Q96T68 719 aa17.02■□□□□ 0.32
SF1-216ENST00000486867 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
SF1-216ENST00000486867 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
SF1-216ENST00000486867 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 LAMB2P55268 1798 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
SF1-216ENST00000486867 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
SF1-216ENST00000486867 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
SF1-216ENST00000486867 KCNA3P22001 575 aa17■□□□□ 0.31
SF1-216ENST00000486867 CACNA1SQ13698 1873 aa17■□□□□ 0.31
SF1-216ENST00000486867 PRR5LQ6MZQ0 368 aa17■□□□□ 0.31
SF1-216ENST00000486867 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
SF1-216ENST00000486867 KLHL34Q8N239 644 aa17■□□□□ 0.31
SF1-216ENST00000486867 VAMP4O75379 141 aa16.99■□□□□ 0.31
SF1-216ENST00000486867 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
SF1-216ENST00000486867 BICDL1Q6ZP65 573 aa16.99■□□□□ 0.31
SF1-216ENST00000486867 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
SF1-216ENST00000486867 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
SF1-216ENST00000486867 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.31
SF1-216ENST00000486867 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
SF1-216ENST00000486867 UBN2Q6ZU65 1347 aa16.98■□□□□ 0.31
SF1-216ENST00000486867 E9PSI1 815 aa16.98■□□□□ 0.31
SF1-216ENST00000486867 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
SF1-216ENST00000486867 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
SF1-216ENST00000486867 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
SF1-216ENST00000486867 DDX60Q8IY21 1712 aaKnown RBP16.98■□□□□ 0.31
SF1-216ENST00000486867 KLRG2A4D1S0 409 aaPredicted RBP16.97■□□□□ 0.31
SF1-216ENST00000486867 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
SF1-216ENST00000486867 DPEP1P16444 411 aa16.96■□□□□ 0.31
SF1-216ENST00000486867 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
SF1-216ENST00000486867 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
SF1-216ENST00000486867 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
SF1-216ENST00000486867 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
SF1-216ENST00000486867 SBF1O95248 1867 aa16.96■□□□□ 0.31
SF1-216ENST00000486867 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.3
SF1-216ENST00000486867 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
SF1-216ENST00000486867 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
SF1-216ENST00000486867 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
SF1-216ENST00000486867 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
SF1-216ENST00000486867 TPTE2Q6XPS3 522 aa16.95■□□□□ 0.3
SF1-216ENST00000486867 NBPF5PQ86XG9 351 aaPredicted RBP16.95■□□□□ 0.3
SF1-216ENST00000486867 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
SF1-216ENST00000486867 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
SF1-216ENST00000486867 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
SF1-216ENST00000486867 MYH3P11055 1940 aa16.94■□□□□ 0.3
SF1-216ENST00000486867 NTSR2O95665 410 aa16.94■□□□□ 0.3
SF1-216ENST00000486867 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
SF1-216ENST00000486867 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
SF1-216ENST00000486867 FER1L6Q2WGJ9 1857 aa16.94■□□□□ 0.3
SF1-216ENST00000486867 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
SF1-216ENST00000486867 PDE6BP35913 854 aa16.93■□□□□ 0.3
SF1-216ENST00000486867 ST5P78524 1137 aa16.93■□□□□ 0.3
SF1-216ENST00000486867 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
SF1-216ENST00000486867 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
SF1-216ENST00000486867 ADCY9O60503 1353 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 ABCC12Q96J65 1359 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 GPTP24298 496 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 CHRNA5P30532 468 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 NLRP10Q86W26 655 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 UTRNP46939 3433 aa16.92■□□□□ 0.3
SF1-216ENST00000486867 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
SF1-216ENST00000486867 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
SF1-216ENST00000486867 GPR162Q16538 588 aa16.91■□□□□ 0.3
SF1-216ENST00000486867 SLC10A5Q5PT55 438 aa16.91■□□□□ 0.3
SF1-216ENST00000486867 PPP1R42Q7Z4L9 355 aa16.91■□□□□ 0.3
SF1-216ENST00000486867 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms