RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 IRX1P78414 480 aaPredicted RBP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SLC3A2P08195 630 aaKnown RBP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SYT1P21579 422 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SATB1Q01826 763 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SLFN5Q08AF3 891 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 FKBP5Q13451 457 aaPredicted RBP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 MMS22LQ6ZRQ5 1243 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 CEP131Q9UPN4 1083 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 CEP104O60308 925 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 N4BP2L2Q92802 583 aaPredicted RBP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 CDK5RAP3Q96JB5 506 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SAFB2Q14151 953 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRDM15-212ENST00000486812 VCX3BQ9H321 246 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
PRDM15-212ENST00000486812 SOX12O15370 315 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 UBASH3AP57075 661 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 VCX3AQ9NNX9 186 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
PRDM15-212ENST00000486812 MAGEA9P43362 315 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 CABS1Q96KC9 395 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 SMC6Q96SB8 1091 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 YY1AP1Q9H869 796 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 RNF10Q8N5U6 811 aaKnown RBP11.86□□□□□ -0.51
PRDM15-212ENST00000486812 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
PRDM15-212ENST00000486812 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
PRDM15-212ENST00000486812 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRDM15-212ENST00000486812 RHOXF2BP0C7M4 288 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 FERMT3Q86UX7 667 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 PIK3R5Q8WYR1 880 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 CETN3O15182 167 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 LIG3P49916 1009 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 FSIP1Q8NA03 581 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 BRD3Q15059 726 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 CPLX3Q8WVH0 158 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 IRAK4Q9NWZ3 460 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 TPX2Q9ULW0 747 aaKnown RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 USH1CQ9Y6N9 552 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 CFAP58Q5T655 872 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 BAIAP2L1Q9UHR4 511 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 GNAI2P04899 355 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 VAV2P52735 878 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 NLRP5P59047 1200 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 TCP11L2Q8N4U5 519 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 GPR161Q8N6U8 529 aaKnown RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 GEMIN8Q9NWZ8 242 aaKnown RBP11.85□□□□□ -0.51
PRDM15-212ENST00000486812 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 ELP1O95163 1332 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 ACTN2P35609 894 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 TYRO3Q06418 890 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 AMOTL1Q8IY63 956 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 SUFUQ9UMX1 484 aa11.85□□□□□ -0.51
PRDM15-212ENST00000486812 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 MATR3P43243 847 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 PUF60Q9UHX1 559 aaKnown RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 PHLDB2Q86SQ0 1253 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 TRIM6Q9C030 488 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 LARSQ9P2J5 1176 aaKnown RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 E2F4Q16254 413 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 SELENOSQ9BQE4 189 aa11.84□□□□□ -0.51
PRDM15-212ENST00000486812 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 INTS8Q75QN2 995 aaKnown RBP11.84□□□□□ -0.51
PRDM15-212ENST00000486812 CETN2P41208 172 aa11.83□□□□□ -0.51
PRDM15-212ENST00000486812 VPS36Q86VN1 386 aa11.83□□□□□ -0.51
PRDM15-212ENST00000486812 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.51
PRDM15-212ENST00000486812 CIB2O75838 187 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 CARMIL1Q5VZK9 1371 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 PDE1CQ14123 709 aaPredicted RBP11.83□□□□□ -0.52
PRDM15-212ENST00000486812 A0A1W2PRG0 241 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 CREB3O43889 395 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 HNRNPH2P55795 449 aaKnown RBP11.83□□□□□ -0.52
PRDM15-212ENST00000486812 CHMP4BP1P59074 171 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
PRDM15-212ENST00000486812 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 TERF2Q15554 542 aa11.83□□□□□ -0.52
PRDM15-212ENST00000486812 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
PRDM15-212ENST00000486812 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms