RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 NOGQ13253 232 aa11.69□□□□□ -0.54
APTX-228ENST00000486724 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
APTX-228ENST00000486724 SAGE1Q9NXZ1 904 aa11.69□□□□□ -0.54
APTX-228ENST00000486724 LMOD1P29536 600 aaPredicted RBP11.68□□□□□ -0.54
APTX-228ENST00000486724 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
APTX-228ENST00000486724 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
APTX-228ENST00000486724 CTU1Q7Z7A3 348 aaKnown RBP11.68□□□□□ -0.54
APTX-228ENST00000486724 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
APTX-228ENST00000486724 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
APTX-228ENST00000486724 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
APTX-228ENST00000486724 BCORQ6W2J9 1755 aa11.68□□□□□ -0.54
APTX-228ENST00000486724 FZD9O00144 591 aa11.67□□□□□ -0.54
APTX-228ENST00000486724 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
APTX-228ENST00000486724 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-228ENST00000486724 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
APTX-228ENST00000486724 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
APTX-228ENST00000486724 FYB1O15117 783 aa11.66□□□□□ -0.54
APTX-228ENST00000486724 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
APTX-228ENST00000486724 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
APTX-228ENST00000486724 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
APTX-228ENST00000486724 KIF20BQ96Q89 1820 aa11.65□□□□□ -0.54
APTX-228ENST00000486724 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
APTX-228ENST00000486724 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
APTX-228ENST00000486724 EYA1Q99502 592 aa11.65□□□□□ -0.54
APTX-228ENST00000486724 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
APTX-228ENST00000486724 SRGNP10124 158 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 SIN3AQ96ST3 1273 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
APTX-228ENST00000486724 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
APTX-228ENST00000486724 SCNN1DP51172 638 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 PKN2Q16513 984 aaKnown RBP11.63□□□□□ -0.55
APTX-228ENST00000486724 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 GJA3Q9Y6H8 435 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 COL6A3P12111 3177 aa11.63□□□□□ -0.55
APTX-228ENST00000486724 NPHP1O15259 732 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
APTX-228ENST00000486724 EPS15P42566 896 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
APTX-228ENST00000486724 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 ZBTB1Q9Y2K1 713 aa11.62□□□□□ -0.55
APTX-228ENST00000486724 PPM1GO15355 546 aaPredicted RBP11.61□□□□□ -0.55
APTX-228ENST00000486724 TRPA1O75762 1119 aa11.61□□□□□ -0.55
APTX-228ENST00000486724 ST5P78524 1137 aa11.61□□□□□ -0.55
APTX-228ENST00000486724 TBC1D9BQ66K14 1250 aa11.61□□□□□ -0.55
APTX-228ENST00000486724 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
APTX-228ENST00000486724 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
APTX-228ENST00000486724 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
APTX-228ENST00000486724 AKAP11Q9UKA4 1901 aa11.6□□□□□ -0.55
APTX-228ENST00000486724 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
APTX-228ENST00000486724 MTHFSP49914 203 aa11.6□□□□□ -0.55
APTX-228ENST00000486724 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
APTX-228ENST00000486724 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
APTX-228ENST00000486724 HUNKP57058 714 aa11.59□□□□□ -0.55
APTX-228ENST00000486724 GLIS2Q9BZE0 524 aaPredicted RBP11.59□□□□□ -0.55
APTX-228ENST00000486724 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
APTX-228ENST00000486724 A0A087WZG4 1122 aa11.58□□□□□ -0.56
APTX-228ENST00000486724 FAM155AB1AL88 458 aaPredicted RBP11.58□□□□□ -0.56
APTX-228ENST00000486724 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
APTX-228ENST00000486724 SYNE4Q8N205 404 aa11.58□□□□□ -0.56
APTX-228ENST00000486724 HTTP42858 3142 aa11.58□□□□□ -0.56
APTX-228ENST00000486724 COL4A5P29400 1685 aa11.58□□□□□ -0.56
APTX-228ENST00000486724 NPR1P16066 1061 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 KIF23Q02241 960 aaPredicted RBP11.57□□□□□ -0.56
APTX-228ENST00000486724 AMOTQ4VCS5 1084 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
APTX-228ENST00000486724 BRCA2P51587 3418 aa11.57□□□□□ -0.56
APTX-228ENST00000486724 CENPFP49454 3210 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
APTX-228ENST00000486724 RGMBQ6NW40 437 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 SETDB2Q96T68 719 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 PSMD1Q99460 953 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
APTX-228ENST00000486724 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
APTX-228ENST00000486724 FBXO46Q6PJ61 603 aaPredicted RBP11.55□□□□□ -0.56
APTX-228ENST00000486724 GPRC5DQ9NZD1 345 aa11.55□□□□□ -0.56
APTX-228ENST00000486724 PITPNM2Q9BZ72 1349 aa11.55□□□□□ -0.56
APTX-228ENST00000486724 SNED1Q8TER0 1413 aa11.54□□□□□ -0.56
APTX-228ENST00000486724 CDC37L1Q7L3B6 337 aa11.54□□□□□ -0.56
APTX-228ENST00000486724 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
APTX-228ENST00000486724 PGAP2Q9UHJ9 254 aa11.54□□□□□ -0.56
APTX-228ENST00000486724 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
APTX-228ENST00000486724 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
APTX-228ENST00000486724 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
APTX-228ENST00000486724 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
APTX-228ENST00000486724 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms