RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 M0R2N6 131 aa8.48□□□□□ -1.05
USP41-204ENST00000486536 MYCP01106 439 aaPredicted RBP8.48□□□□□ -1.05
USP41-204ENST00000486536 RAB15P59190 212 aa8.48□□□□□ -1.05
USP41-204ENST00000486536 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP41-204ENST00000486536 ZNF326Q5BKZ1 582 aaKnown RBP8.48□□□□□ -1.05
USP41-204ENST00000486536 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP41-204ENST00000486536 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
USP41-204ENST00000486536 DNMT3AQ9Y6K1 912 aaPredicted RBP8.48□□□□□ -1.05
USP41-204ENST00000486536 RICTORQ6R327 1708 aa8.48□□□□□ -1.05
USP41-204ENST00000486536 YEATS2Q9ULM3 1422 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 ATP10AO60312 1499 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 PTPRMP28827 1452 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 C21orf2O43822 256 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 ECM1Q16610 540 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
USP41-204ENST00000486536 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 REREQ9P2R6 1566 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 DIP2CQ9Y2E4 1556 aa8.47□□□□□ -1.05
USP41-204ENST00000486536 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.05
USP41-204ENST00000486536 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.06
USP41-204ENST00000486536 MAPK1P28482 360 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 PTPN5P54829 565 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
USP41-204ENST00000486536 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
USP41-204ENST00000486536 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
USP41-204ENST00000486536 VWDEQ8N2E2 1590 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 DEPDC5O75140 1603 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 IQGAP3Q86VI3 1631 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 ABCA6Q8N139 1617 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 TONSLQ96HA7 1378 aa8.46□□□□□ -1.06
USP41-204ENST00000486536 RPRD2Q5VT52 1461 aaKnown RBP8.45□□□□□ -1.06
USP41-204ENST00000486536 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
USP41-204ENST00000486536 LMTK2Q8IWU2 1503 aa8.45□□□□□ -1.06
USP41-204ENST00000486536 FKBP5Q13451 457 aaPredicted RBP8.45□□□□□ -1.06
USP41-204ENST00000486536 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
USP41-204ENST00000486536 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
USP41-204ENST00000486536 ZNF358Q9NW07 568 aa8.45□□□□□ -1.06
USP41-204ENST00000486536 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
USP41-204ENST00000486536 AGLP35573 1532 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 BCORL1Q5H9F3 1711 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 POTEMA6NI47 508 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 SCTRP47872 440 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 NAA30Q147X3 362 aaPredicted RBP8.44□□□□□ -1.06
USP41-204ENST00000486536 DCTN4Q9UJW0 460 aa8.44□□□□□ -1.06
USP41-204ENST00000486536 RNF17Q9BXT8 1623 aaKnown RBP8.43□□□□□ -1.06
USP41-204ENST00000486536 ERVH48-1M5A8F1 160 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 ARHGAP4P98171 946 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 GGT6Q6P531 493 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 ZSCAN29Q8IWY8 852 aaPredicted RBP8.43□□□□□ -1.06
USP41-204ENST00000486536 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 ASB16Q96NS5 453 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 MROH1Q8NDA8 1641 aa8.43□□□□□ -1.06
USP41-204ENST00000486536 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
USP41-204ENST00000486536 IGFBP4P22692 258 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
USP41-204ENST00000486536 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
USP41-204ENST00000486536 VASH1Q7L8A9 365 aaPredicted RBP8.42□□□□□ -1.06
USP41-204ENST00000486536 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 ARID4BQ4LE39 1312 aaPredicted RBP8.42□□□□□ -1.06
USP41-204ENST00000486536 WASHC2CQ9Y4E1 1318 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 PTPRTO14522 1441 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 ARHGEF40Q8TER5 1519 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 MADDQ8WXG6 1647 aa8.42□□□□□ -1.06
USP41-204ENST00000486536 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
USP41-204ENST00000486536 CCDC144AA2RUR9 1427 aa8.41□□□□□ -1.06
USP41-204ENST00000486536 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
USP41-204ENST00000486536 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
USP41-204ENST00000486536 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
USP41-204ENST00000486536 ARHGAP31Q2M1Z3 1444 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 BACH1O14867 736 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 ERVK-9P63128 1117 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 TNS4Q8IZW8 715 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 HELQQ8TDG4 1101 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.06
USP41-204ENST00000486536 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
USP41-204ENST00000486536 TET3O43151 1660 aa8.4□□□□□ -1.07
USP41-204ENST00000486536 ABCC3O15438 1527 aa8.39□□□□□ -1.07
USP41-204ENST00000486536 EFCAB6Q5THR3 1501 aa8.39□□□□□ -1.07
USP41-204ENST00000486536 FOXO3O43524 673 aa8.39□□□□□ -1.07
USP41-204ENST00000486536 GDF10P55107 478 aa8.39□□□□□ -1.07
USP41-204ENST00000486536 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
USP41-204ENST00000486536 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
USP41-204ENST00000486536 FAM13AO94988 1023 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 TCF3P15923 654 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 NPR3P17342 541 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 VAMP1P23763 118 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 SCNN1DP51172 638 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 TRIM32Q13049 653 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 COL19A1Q14993 1142 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 OSBPL3Q9H4L5 887 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 TRPM2O94759 1503 aa8.38□□□□□ -1.07
USP41-204ENST00000486536 NPATQ14207 1427 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms