RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 KCPQ6ZWJ8 1503 aa25.01■■□□□ 1.59
HPS3-206ENST00000486530 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
HPS3-206ENST00000486530 REC8O95072 547 aa25■■□□□ 1.59
HPS3-206ENST00000486530 IGKV5-2P06315 115 aa25■■□□□ 1.59
HPS3-206ENST00000486530 IL1RAPL2Q9NP60 686 aa25■■□□□ 1.59
HPS3-206ENST00000486530 USP26Q9BXU7 913 aa24.99■■□□□ 1.59
HPS3-206ENST00000486530 NEURL1BA8MQ27 555 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 TSHZ3Q63HK5 1081 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 ANKRD13DQ6ZTN6 518 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 PLCH1Q4KWH8 1693 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 ERC2O15083 957 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 TNS2Q63HR2 1409 aa24.98■■□□□ 1.59
HPS3-206ENST00000486530 SUCLG2Q96I99 432 aa24.97■■□□□ 1.59
HPS3-206ENST00000486530 ERC1Q8IUD2 1116 aa24.96■■□□□ 1.59
HPS3-206ENST00000486530 MYD88Q99836 296 aa24.96■■□□□ 1.59
HPS3-206ENST00000486530 SPATA31A1Q5TZJ5 1347 aa24.95■■□□□ 1.58
HPS3-206ENST00000486530 NUP188Q5SRE5 1749 aa24.95■■□□□ 1.58
HPS3-206ENST00000486530 NRAPQ86VF7 1730 aa24.95■■□□□ 1.58
HPS3-206ENST00000486530 OS9Q13438 667 aaPredicted RBP24.95■■□□□ 1.58
HPS3-206ENST00000486530 GCKRQ14397 625 aa24.95■■□□□ 1.58
HPS3-206ENST00000486530 NUTM1Q86Y26 1132 aa24.94■■□□□ 1.58
HPS3-206ENST00000486530 TRIM6-TRIM34B2RNG4 842 aa24.94■■□□□ 1.58
HPS3-206ENST00000486530 KAZALD1Q96I82 304 aa24.94■■□□□ 1.58
HPS3-206ENST00000486530 BICC1Q9H694 974 aaKnown RBP24.94■■□□□ 1.58
HPS3-206ENST00000486530 WNK3Q9BYP7 1800 aa24.93■■□□□ 1.58
HPS3-206ENST00000486530 USP42Q9H9J4 1324 aaKnown RBP24.93■■□□□ 1.58
HPS3-206ENST00000486530 EXOC5O00471 708 aa24.93■■□□□ 1.58
HPS3-206ENST00000486530 RABEP1Q15276 862 aa24.93■■□□□ 1.58
HPS3-206ENST00000486530 THRAP3Q9Y2W1 955 aaKnown RBP24.93■■□□□ 1.58
HPS3-206ENST00000486530 SLIT2O94813 1529 aa24.92■■□□□ 1.58
HPS3-206ENST00000486530 PLBD2Q8NHP8 589 aa24.92■■□□□ 1.58
HPS3-206ENST00000486530 PIP4K2AP48426 406 aaPredicted RBP24.92■■□□□ 1.58
HPS3-206ENST00000486530 RILPL2Q969X0 211 aa24.92■■□□□ 1.58
HPS3-206ENST00000486530 COL15A1P39059 1388 aa24.91■■□□□ 1.58
HPS3-206ENST00000486530 CLASRPQ8N2M8 674 aaKnown RBP24.91■■□□□ 1.58
HPS3-206ENST00000486530 PI4K2BQ8TCG2 481 aa24.91■■□□□ 1.58
HPS3-206ENST00000486530 ESYT1Q9BSJ8 1104 aa24.91■■□□□ 1.58
HPS3-206ENST00000486530 CDCA7Q9BWT1 371 aaPredicted RBP24.91■■□□□ 1.58
HPS3-206ENST00000486530 JCADQ9P266 1359 aa24.91■■□□□ 1.58
HPS3-206ENST00000486530 TTC41PQ6P2S7 1318 aa24.9■■□□□ 1.58
HPS3-206ENST00000486530 ITGB4P16144 1822 aa24.9■■□□□ 1.58
HPS3-206ENST00000486530 SPATA31A5Q5VU36 1347 aa24.9■■□□□ 1.58
HPS3-206ENST00000486530 SPATA31A7Q8IWB4 1347 aa24.9■■□□□ 1.58
HPS3-206ENST00000486530 FRAT2O75474 233 aaPredicted RBP24.89■■□□□ 1.58
HPS3-206ENST00000486530 CHMLP26374 656 aa24.89■■□□□ 1.58
HPS3-206ENST00000486530 HSPA1LP34931 641 aa24.89■■□□□ 1.58
HPS3-206ENST00000486530 SPRYD3Q8NCJ5 442 aa24.89■■□□□ 1.58
HPS3-206ENST00000486530 TMOD3Q9NYL9 352 aa24.89■■□□□ 1.58
HPS3-206ENST00000486530 CHMP5Q9NZZ3 219 aa24.89■■□□□ 1.58
HPS3-206ENST00000486530 PIGBQ92521 554 aa24.89■■□□□ 1.57
HPS3-206ENST00000486530 LRP6O75581 1613 aa24.88■■□□□ 1.57
HPS3-206ENST00000486530 NBPF26B4DH59 902 aa24.88■■□□□ 1.57
HPS3-206ENST00000486530 K7ELQ4 463 aaPredicted RBP24.88■■□□□ 1.57
HPS3-206ENST00000486530 NBPF14Q5TI25 921 aa24.88■■□□□ 1.57
HPS3-206ENST00000486530 NBPF10Q6P3W6 841 aaKnown RBP24.88■■□□□ 1.57
HPS3-206ENST00000486530 NBPF15Q8N660 670 aa24.88■■□□□ 1.57
HPS3-206ENST00000486530 PA2G4Q9UQ80 394 aaKnown RBP24.88■■□□□ 1.57
HPS3-206ENST00000486530 RBM42Q9BTD8 480 aaKnown RBP24.87■■□□□ 1.57
HPS3-206ENST00000486530 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
HPS3-206ENST00000486530 UNC5CLQ8IV45 518 aa24.87■■□□□ 1.57
HPS3-206ENST00000486530 GPATCH3Q96I76 525 aa24.86■■□□□ 1.57
HPS3-206ENST00000486530 PTCD1O75127 700 aaKnown RBP24.85■■□□□ 1.57
HPS3-206ENST00000486530 CD2BP2O95400 341 aaKnown RBP24.85■■□□□ 1.57
HPS3-206ENST00000486530 DEKP35659 375 aaKnown RBP24.85■■□□□ 1.57
HPS3-206ENST00000486530 G3BP1Q13283 466 aaKnown RBP eCLIP24.85■■□□□ 1.57
HPS3-206ENST00000486530 GLRX3O76003 335 aaKnown RBP24.85■■□□□ 1.57
HPS3-206ENST00000486530 CNTROBQ8N137 903 aa24.85■■□□□ 1.57
HPS3-206ENST00000486530 TJP1Q07157 1748 aa24.84■■□□□ 1.57
HPS3-206ENST00000486530 BARGINQ6ZT62 677 aa24.84■■□□□ 1.57
HPS3-206ENST00000486530 ASAP1Q9ULH1 1129 aa24.84■■□□□ 1.57
HPS3-206ENST00000486530 EPB41L2O43491 1005 aaKnown RBP24.83■■□□□ 1.57
HPS3-206ENST00000486530 IFIT2P09913 472 aaKnown RBP24.83■■□□□ 1.57
HPS3-206ENST00000486530 DDIT3P35638 169 aa24.83■■□□□ 1.57
HPS3-206ENST00000486530 ATG3Q9NT62 314 aa24.83■■□□□ 1.57
HPS3-206ENST00000486530 A1BGP04217 495 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 MCCP23508 829 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 DDB1Q16531 1140 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 RABL6Q3YEC7 729 aaPredicted RBP24.82■■□□□ 1.56
HPS3-206ENST00000486530 EPHA10Q5JZY3 1008 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 UBE3BQ7Z3V4 1068 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 ECHDC1Q9NTX5 307 aa24.82■■□□□ 1.56
HPS3-206ENST00000486530 CIZ1Q9ULV3 898 aaPredicted RBP24.82■■□□□ 1.56
HPS3-206ENST00000486530 A0A087WZG4 1122 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 VSIG10Q8N0Z9 540 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 ATP5J2-PTCD1G3V325 749 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 SASH1O94885 1247 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 C8orf37Q96NL8 207 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 TEX13AQ9BXU3 409 aaPredicted RBP24.81■■□□□ 1.56
HPS3-206ENST00000486530 BCL9O00512 1426 aa24.81■■□□□ 1.56
HPS3-206ENST00000486530 ST18O60284 1047 aa24.8■■□□□ 1.56
HPS3-206ENST00000486530 HSP90AA1P07900 732 aaKnown RBP24.8■■□□□ 1.56
HPS3-206ENST00000486530 CASP7P55210 303 aa24.8■■□□□ 1.56
HPS3-206ENST00000486530 TTLL7Q6ZT98 887 aa24.8■■□□□ 1.56
HPS3-206ENST00000486530 AACSQ86V21 672 aa24.8■■□□□ 1.56
HPS3-206ENST00000486530 CCDC9Q9Y3X0 531 aaKnown RBP24.8■■□□□ 1.56
HPS3-206ENST00000486530 BCL9LQ86UU0 1499 aa24.8■■□□□ 1.56
HPS3-206ENST00000486530 SPATA31A6Q5VVP1 1343 aa24.79■■□□□ 1.56
HPS3-206ENST00000486530 FNBP4Q8N3X1 1017 aaPredicted RBP24.79■■□□□ 1.56
HPS3-206ENST00000486530 ANO2Q9NQ90 1003 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms