RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 XRCC6P12956 609 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLX4-203ENST00000486524 AACSQ86V21 672 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 PANK2Q9BZ23 570 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
SLX4-203ENST00000486524 TNS3Q68CZ2 1445 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 NUCB2P80303 420 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
SLX4-203ENST00000486524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
SLX4-203ENST00000486524 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 MTX1Q13505 466 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 CABP4P57796 275 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 DCAF5Q96JK2 942 aa13.67□□□□□ -0.22
SLX4-203ENST00000486524 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
SLX4-203ENST00000486524 NCLP19338 710 aaKnown RBP13.66□□□□□ -0.22
SLX4-203ENST00000486524 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLX4-203ENST00000486524 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
SLX4-203ENST00000486524 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
SLX4-203ENST00000486524 C5P01031 1676 aa13.66□□□□□ -0.22
SLX4-203ENST00000486524 SGSM2O43147 1006 aa13.66□□□□□ -0.22
SLX4-203ENST00000486524 GLRX3O76003 335 aaKnown RBP13.66□□□□□ -0.22
SLX4-203ENST00000486524 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
SLX4-203ENST00000486524 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
SLX4-203ENST00000486524 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
SLX4-203ENST00000486524 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
SLX4-203ENST00000486524 ECHDC1Q9NTX5 307 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 SCN11AQ9UI33 1791 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
SLX4-203ENST00000486524 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
SLX4-203ENST00000486524 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 LARP6Q9BRS8 491 aaKnown RBP13.65□□□□□ -0.22
SLX4-203ENST00000486524 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
SLX4-203ENST00000486524 SASH1O94885 1247 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 HSPA4P34932 840 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 ANAPC15P60006 121 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 GPATCH3Q96I76 525 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.23
SLX4-203ENST00000486524 TLR7Q9NYK1 1049 aaKnown RBP13.65□□□□□ -0.23
SLX4-203ENST00000486524 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 DCCP43146 1447 aa13.65□□□□□ -0.23
SLX4-203ENST00000486524 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
SLX4-203ENST00000486524 GCKRQ14397 625 aa13.64□□□□□ -0.23
SLX4-203ENST00000486524 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
SLX4-203ENST00000486524 COL18A1P39060 1754 aa13.64□□□□□ -0.23
SLX4-203ENST00000486524 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
SLX4-203ENST00000486524 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
SLX4-203ENST00000486524 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
SLX4-203ENST00000486524 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
SLX4-203ENST00000486524 RAD50Q92878 1312 aa13.63□□□□□ -0.23
SLX4-203ENST00000486524 PTMSP20962 102 aa13.63□□□□□ -0.23
SLX4-203ENST00000486524 FOXD4L6Q3SYB3 417 aaPredicted RBP13.63□□□□□ -0.23
SLX4-203ENST00000486524 FOXD4L3Q6VB84 417 aaPredicted RBP13.63□□□□□ -0.23
SLX4-203ENST00000486524 UBE3BQ7Z3V4 1068 aa13.63□□□□□ -0.23
SLX4-203ENST00000486524 LSG1Q9H089 658 aaKnown RBP13.63□□□□□ -0.23
SLX4-203ENST00000486524 CPA1P15085 419 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 MCM2P49736 904 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 UTYO14607 1347 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
SLX4-203ENST00000486524 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
SLX4-203ENST00000486524 BOLA2Q9H3K6 86 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
SLX4-203ENST00000486524 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
SLX4-203ENST00000486524 MRE11P49959 708 aa13.61□□□□□ -0.23
SLX4-203ENST00000486524 PTH1RQ03431 593 aa13.61□□□□□ -0.23
SLX4-203ENST00000486524 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
SLX4-203ENST00000486524 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
SLX4-203ENST00000486524 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
SLX4-203ENST00000486524 LRP10Q7Z4F1 713 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 A0A087WZG4 1122 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 DTNBO60941 627 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
SLX4-203ENST00000486524 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 CHMP3Q9Y3E7 222 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 KLHL40Q2TBA0 621 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
SLX4-203ENST00000486524 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
SLX4-203ENST00000486524 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
SLX4-203ENST00000486524 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
SLX4-203ENST00000486524 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
SLX4-203ENST00000486524 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
SLX4-203ENST00000486524 CUL4AQ13619 759 aa13.59□□□□□ -0.23
SLX4-203ENST00000486524 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
SLX4-203ENST00000486524 CPDO75976 1380 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms