RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 WDR17Q8IZU2 1322 aa9.76□□□□□ -0.85
PUDP-204ENST00000486446 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
PUDP-204ENST00000486446 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 LTN1O94822 1766 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 CLCN1P35523 988 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 AMHR2Q16671 573 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 POLR3GLQ9BT43 218 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
PUDP-204ENST00000486446 OVOS2A0A0J9YW53 1432 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 OVOS2Q6IE36 1432 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 PARP4Q9UKK3 1724 aaKnown RBP9.74□□□□□ -0.85
PUDP-204ENST00000486446 ABCC6O95255 1503 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 CD46P15529 392 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 GCGRP47871 477 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 COG3Q96JB2 828 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 AK7Q96M32 723 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 WASHC2AQ641Q2 1341 aa9.74□□□□□ -0.85
PUDP-204ENST00000486446 WNK3Q9BYP7 1800 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 TRIM66O15016 1216 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 TRIM37O94972 964 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 DDB1Q16531 1140 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 ZNF516Q92618 1163 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
PUDP-204ENST00000486446 LRRC37A3O60309 1634 aa9.73□□□□□ -0.85
PUDP-204ENST00000486446 BLOC1S3Q6QNY0 202 aa9.72□□□□□ -0.85
PUDP-204ENST00000486446 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
PUDP-204ENST00000486446 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
PUDP-204ENST00000486446 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
PUDP-204ENST00000486446 NLRP2Q9NX02 1062 aa9.72□□□□□ -0.85
PUDP-204ENST00000486446 SUPT16HQ9Y5B9 1047 aaKnown RBP9.72□□□□□ -0.85
PUDP-204ENST00000486446 TNS1Q9HBL0 1735 aaKnown RBP9.72□□□□□ -0.85
PUDP-204ENST00000486446 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
PUDP-204ENST00000486446 MYOM1P52179 1685 aa9.71□□□□□ -0.85
PUDP-204ENST00000486446 KIF20BQ96Q89 1820 aa9.71□□□□□ -0.85
PUDP-204ENST00000486446 COPS2P61201 443 aa9.71□□□□□ -0.86
PUDP-204ENST00000486446 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.86
PUDP-204ENST00000486446 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
PUDP-204ENST00000486446 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.86
PUDP-204ENST00000486446 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
PUDP-204ENST00000486446 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
PUDP-204ENST00000486446 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
PUDP-204ENST00000486446 FYB1O15117 783 aa9.7□□□□□ -0.86
PUDP-204ENST00000486446 ZPR1O75312 459 aa9.7□□□□□ -0.86
PUDP-204ENST00000486446 APBA3O96018 575 aa9.7□□□□□ -0.86
PUDP-204ENST00000486446 AMPHP49418 695 aa9.7□□□□□ -0.86
PUDP-204ENST00000486446 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
PUDP-204ENST00000486446 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 EXOC5O00471 708 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 FBLN1P23142 703 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 MAP3K19Q56UN5 1328 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 IP6K1Q92551 441 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 NSD3Q9BZ95 1437 aa9.69□□□□□ -0.86
PUDP-204ENST00000486446 DISP2A7MBM2 1401 aa9.68□□□□□ -0.86
PUDP-204ENST00000486446 HOXC9P31274 260 aa9.68□□□□□ -0.86
PUDP-204ENST00000486446 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
PUDP-204ENST00000486446 SPON1Q9HCB6 807 aa9.68□□□□□ -0.86
PUDP-204ENST00000486446 PEAK1Q9H792 1746 aa9.68□□□□□ -0.86
PUDP-204ENST00000486446 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
PUDP-204ENST00000486446 IL2RBP14784 551 aa9.67□□□□□ -0.86
PUDP-204ENST00000486446 FUT2Q10981 343 aa9.67□□□□□ -0.86
PUDP-204ENST00000486446 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
PUDP-204ENST00000486446 MORN1Q5T089 497 aa9.67□□□□□ -0.86
PUDP-204ENST00000486446 MARCH10Q8NA82 808 aaPredicted RBP9.67□□□□□ -0.86
PUDP-204ENST00000486446 TNS2Q63HR2 1409 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 KIF7Q2M1P5 1343 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 KCNQ2O43526 872 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 NR1I2O75469 434 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
PUDP-204ENST00000486446 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
PUDP-204ENST00000486446 PUS10Q3MIT2 529 aaKnown RBP9.66□□□□□ -0.86
PUDP-204ENST00000486446 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 CAMKK2Q96RR4 588 aa9.66□□□□□ -0.86
PUDP-204ENST00000486446 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 PARD3Q8TEW0 1356 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 CGNL1Q0VF96 1302 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 GIGYF2Q6Y7W6 1299 aaKnown RBP9.65□□□□□ -0.86
PUDP-204ENST00000486446 SCUBE3Q8IX30 993 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 SBF2Q86WG5 1849 aa9.65□□□□□ -0.86
PUDP-204ENST00000486446 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
PUDP-204ENST00000486446 KDM4AO75164 1064 aa9.64□□□□□ -0.87
PUDP-204ENST00000486446 RGS20O76081 388 aa9.64□□□□□ -0.87
PUDP-204ENST00000486446 PDE4DQ08499 809 aa9.64□□□□□ -0.87
PUDP-204ENST00000486446 PRKRIP1Q9H875 184 aaPredicted RBP9.64□□□□□ -0.87
PUDP-204ENST00000486446 RGPD2P0DJD1 1756 aa9.64□□□□□ -0.87
PUDP-204ENST00000486446 RREB1Q92766 1687 aa9.64□□□□□ -0.87
PUDP-204ENST00000486446 NUP188Q5SRE5 1749 aa9.63□□□□□ -0.87
PUDP-204ENST00000486446 PPM1GO15355 546 aaPredicted RBP9.63□□□□□ -0.87
PUDP-204ENST00000486446 GIGYF1O75420 1035 aaPredicted RBP9.63□□□□□ -0.87
PUDP-204ENST00000486446 PTF1AQ7RTS3 328 aa9.63□□□□□ -0.87
PUDP-204ENST00000486446 DDX54Q8TDD1 881 aaKnown RBP9.63□□□□□ -0.87
PUDP-204ENST00000486446 PANK3Q9H999 370 aa9.63□□□□□ -0.87
PUDP-204ENST00000486446 FLT4P35916 1363 aa9.63□□□□□ -0.87
PUDP-204ENST00000486446 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
PUDP-204ENST00000486446 USP46P62068 366 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms