RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 HSH2DQ96JZ2 352 aa10.51□□□□□ -0.73
LTN1-206ENST00000486427 PCDHGC4Q9Y5F7 938 aa10.51□□□□□ -0.73
LTN1-206ENST00000486427 ATXN7O15265 892 aaPredicted RBP10.5□□□□□ -0.73
LTN1-206ENST00000486427 FIGNL1Q6PIW4 674 aa10.5□□□□□ -0.73
LTN1-206ENST00000486427 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
LTN1-206ENST00000486427 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
LTN1-206ENST00000486427 GPC6Q9Y625 555 aaPredicted RBP10.5□□□□□ -0.73
LTN1-206ENST00000486427 GJA3Q9Y6H8 435 aa10.5□□□□□ -0.73
LTN1-206ENST00000486427 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
LTN1-206ENST00000486427 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
LTN1-206ENST00000486427 INSM1Q01101 510 aaPredicted RBP10.49□□□□□ -0.73
LTN1-206ENST00000486427 ZNF280CQ8ND82 737 aa10.49□□□□□ -0.73
LTN1-206ENST00000486427 ATXN7L1Q9ULK2 861 aaPredicted RBP10.49□□□□□ -0.73
LTN1-206ENST00000486427 CARNS1A5YM72 827 aa10.48□□□□□ -0.73
LTN1-206ENST00000486427 MX2P20592 715 aa10.48□□□□□ -0.73
LTN1-206ENST00000486427 SAMD5Q5TGI4 173 aa10.48□□□□□ -0.73
LTN1-206ENST00000486427 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
LTN1-206ENST00000486427 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
LTN1-206ENST00000486427 CXXC1Q9P0U4 656 aaPredicted RBP10.48□□□□□ -0.73
LTN1-206ENST00000486427 PHF24Q9UPV7 400 aa10.48□□□□□ -0.73
LTN1-206ENST00000486427 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 SRSF11Q05519 484 aaKnown RBP10.47□□□□□ -0.73
LTN1-206ENST00000486427 TNP2Q05952 138 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 RTN1Q16799 776 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 IGF1RP08069 1367 aa10.47□□□□□ -0.73
LTN1-206ENST00000486427 KHNYNO15037 678 aaKnown RBP10.46□□□□□ -0.73
LTN1-206ENST00000486427 FAM157BP0CG42 384 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
LTN1-206ENST00000486427 FGFR3P22607 806 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 CTBSQ01459 385 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 CAPN12Q6ZSI9 719 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 WHAMMQ8TF30 809 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 VTI1AQ96AJ9 217 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 NEUROD4Q9HD90 331 aa10.46□□□□□ -0.73
LTN1-206ENST00000486427 C2CD2LO14523 706 aa10.45□□□□□ -0.74
LTN1-206ENST00000486427 MKNK1Q9BUB5 465 aa10.45□□□□□ -0.74
LTN1-206ENST00000486427 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
LTN1-206ENST00000486427 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
LTN1-206ENST00000486427 EFSO43281 561 aa10.44□□□□□ -0.74
LTN1-206ENST00000486427 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
LTN1-206ENST00000486427 KLK14Q9P0G3 267 aa10.44□□□□□ -0.74
LTN1-206ENST00000486427 STK17AQ9UEE5 414 aa10.44□□□□□ -0.74
LTN1-206ENST00000486427 CD33P20138 364 aa10.43□□□□□ -0.74
LTN1-206ENST00000486427 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
LTN1-206ENST00000486427 LRFN2Q9ULH4 789 aa10.43□□□□□ -0.74
LTN1-206ENST00000486427 DGKZQ13574 1117 aa10.42□□□□□ -0.74
LTN1-206ENST00000486427 GRIN2CQ14957 1233 aa10.42□□□□□ -0.74
LTN1-206ENST00000486427 ZNF385CQ66K41 422 aaPredicted RBP10.42□□□□□ -0.74
LTN1-206ENST00000486427 LYPD4Q6UWN0 246 aa10.42□□□□□ -0.74
LTN1-206ENST00000486427 MYO19Q96H55 970 aa10.42□□□□□ -0.74
LTN1-206ENST00000486427 BMP4P12644 408 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 SCNN1AP37088 669 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 TYRO3Q06418 890 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 SFSWAPQ12872 951 aaKnown RBP10.41□□□□□ -0.74
LTN1-206ENST00000486427 COX20Q5RI15 118 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 ACDQ96AP0 544 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 SAP130Q9H0E3 1048 aa10.41□□□□□ -0.74
LTN1-206ENST00000486427 BTLAQ7Z6A9 289 aa10.4□□□□□ -0.74
LTN1-206ENST00000486427 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
LTN1-206ENST00000486427 DMGDHQ9UI17 866 aaKnown RBP10.4□□□□□ -0.74
LTN1-206ENST00000486427 MAP2K3P46734 347 aa10.39□□□□□ -0.75
LTN1-206ENST00000486427 NAA30Q147X3 362 aaPredicted RBP10.39□□□□□ -0.75
LTN1-206ENST00000486427 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
LTN1-206ENST00000486427 BRD7Q9NPI1 651 aa10.39□□□□□ -0.75
LTN1-206ENST00000486427 MARK1Q9P0L2 795 aa10.39□□□□□ -0.75
LTN1-206ENST00000486427 NSFL1CQ9UNZ2 370 aaKnown RBP10.39□□□□□ -0.75
LTN1-206ENST00000486427 TGFBR3LH3BV60 316 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 CELA2BP08218 269 aaPredicted RBP10.38□□□□□ -0.75
LTN1-206ENST00000486427 LAMC2Q13753 1193 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 HIF1AQ16665 826 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 FAM182BQ5T319 152 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 IER5Q5VY09 327 aa10.38□□□□□ -0.75
LTN1-206ENST00000486427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.75
LTN1-206ENST00000486427 SSFA2P28290 1259 aa10.37□□□□□ -0.75
LTN1-206ENST00000486427 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
LTN1-206ENST00000486427 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
LTN1-206ENST00000486427 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
LTN1-206ENST00000486427 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
LTN1-206ENST00000486427 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
LTN1-206ENST00000486427 FAM26DQ5JW98 314 aa10.36□□□□□ -0.75
LTN1-206ENST00000486427 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
LTN1-206ENST00000486427 C16orf46Q6P387 395 aa10.36□□□□□ -0.75
LTN1-206ENST00000486427 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
LTN1-206ENST00000486427 TNFRSF10BO14763 440 aa10.35□□□□□ -0.75
LTN1-206ENST00000486427 ARHGEF15O94989 841 aa10.35□□□□□ -0.75
LTN1-206ENST00000486427 GRNP28799 593 aaKnown RBP10.35□□□□□ -0.75
LTN1-206ENST00000486427 C1orf229Q6ZS94 237 aaPredicted RBP10.35□□□□□ -0.75
LTN1-206ENST00000486427 IFT43Q96FT9 208 aa10.35□□□□□ -0.75
LTN1-206ENST00000486427 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
LTN1-206ENST00000486427 KLF15Q9UIH9 416 aa10.35□□□□□ -0.75
LTN1-206ENST00000486427 IDH3AP50213 366 aa10.34□□□□□ -0.75
LTN1-206ENST00000486427 KCNQ4P56696 695 aa10.34□□□□□ -0.75
LTN1-206ENST00000486427 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
LTN1-206ENST00000486427 MICAL2O94851 1124 aa10.33□□□□□ -0.76
LTN1-206ENST00000486427 BCRP11274 1271 aa10.33□□□□□ -0.76
LTN1-206ENST00000486427 INPP5BP32019 993 aa10.33□□□□□ -0.76
LTN1-206ENST00000486427 ETFBKMTQ8IXQ9 262 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms