RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 CNBD1Q8NA66 436 aa14.39□□□□□ -0.11
SNX21-211ENST00000486336 ZNF622Q969S3 477 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX21-211ENST00000486336 NIP7Q9Y221 180 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX21-211ENST00000486336 GOLGB1Q14789 3259 aaKnown RBP14.39□□□□□ -0.11
SNX21-211ENST00000486336 PDE6BP35913 854 aa14.38□□□□□ -0.11
SNX21-211ENST00000486336 KRT24Q2M2I5 525 aa14.38□□□□□ -0.11
SNX21-211ENST00000486336 SCN7AQ01118 1682 aa14.38□□□□□ -0.11
SNX21-211ENST00000486336 KIAA1551Q9HCM1 1747 aa14.38□□□□□ -0.11
SNX21-211ENST00000486336 ANXA1P04083 346 aa14.37□□□□□ -0.11
SNX21-211ENST00000486336 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
SNX21-211ENST00000486336 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
SNX21-211ENST00000486336 BRIP1Q9BX63 1249 aa14.37□□□□□ -0.11
SNX21-211ENST00000486336 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
SNX21-211ENST00000486336 LAMB4A4D0S4 1761 aa14.37□□□□□ -0.11
SNX21-211ENST00000486336 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
SNX21-211ENST00000486336 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
SNX21-211ENST00000486336 TPTE2Q6XPS3 522 aa14.36□□□□□ -0.11
SNX21-211ENST00000486336 TTLL6Q8N841 843 aa14.36□□□□□ -0.11
SNX21-211ENST00000486336 ZNF526Q8TF50 670 aaPredicted RBP14.36□□□□□ -0.11
SNX21-211ENST00000486336 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
SNX21-211ENST00000486336 MAP3K15Q6ZN16 1313 aa14.36□□□□□ -0.11
SNX21-211ENST00000486336 ERVV-1B6SEH8 477 aa14.35□□□□□ -0.11
SNX21-211ENST00000486336 GPTP24298 496 aa14.35□□□□□ -0.11
SNX21-211ENST00000486336 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
SNX21-211ENST00000486336 MBIPQ9NS73 344 aa14.35□□□□□ -0.11
SNX21-211ENST00000486336 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
SNX21-211ENST00000486336 NRXN2Q9P2S2 1712 aa14.35□□□□□ -0.11
SNX21-211ENST00000486336 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 GNAI1P63096 354 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 PDIA6Q15084 440 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 IFT57Q9NWB7 429 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
SNX21-211ENST00000486336 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
SNX21-211ENST00000486336 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
SNX21-211ENST00000486336 RGL2O15211 777 aa14.33□□□□□ -0.12
SNX21-211ENST00000486336 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
SNX21-211ENST00000486336 COPS6Q7L5N1 327 aa14.33□□□□□ -0.12
SNX21-211ENST00000486336 FAM9BQ8IZU0 186 aa14.33□□□□□ -0.12
SNX21-211ENST00000486336 XAGE3Q8WTP9 111 aa14.33□□□□□ -0.12
SNX21-211ENST00000486336 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
SNX21-211ENST00000486336 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
SNX21-211ENST00000486336 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
SNX21-211ENST00000486336 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
SNX21-211ENST00000486336 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNX21-211ENST00000486336 CHPF2Q9P2E5 772 aa14.32□□□□□ -0.12
SNX21-211ENST00000486336 BRCA1P38398 1863 aaKnown RBP14.31□□□□□ -0.12
SNX21-211ENST00000486336 GIGYF2Q6Y7W6 1299 aaKnown RBP14.31□□□□□ -0.12
SNX21-211ENST00000486336 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
SNX21-211ENST00000486336 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
SNX21-211ENST00000486336 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
SNX21-211ENST00000486336 C21orf2O43822 256 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 HOXB7P09629 217 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 SRGNP10124 158 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 RASSF7Q02833 373 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 ERFEQ4G0M1 354 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 SUSD4Q5VX71 490 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 STYK1Q6J9G0 422 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 CNKSR1Q969H4 720 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
SNX21-211ENST00000486336 ARFGEF1Q9Y6D6 1849 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 ANKRD31Q8N7Z5 1873 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
SNX21-211ENST00000486336 NUP98P52948 1817 aa14.29□□□□□ -0.12
SNX21-211ENST00000486336 NPR1P16066 1061 aa14.28□□□□□ -0.12
SNX21-211ENST00000486336 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
SNX21-211ENST00000486336 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
SNX21-211ENST00000486336 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
SNX21-211ENST00000486336 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
SNX21-211ENST00000486336 ADCY9O60503 1353 aa14.27□□□□□ -0.12
SNX21-211ENST00000486336 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
SNX21-211ENST00000486336 PARP10Q53GL7 1025 aa14.27□□□□□ -0.13
SNX21-211ENST00000486336 HSP90AB3PQ58FF7 597 aa14.27□□□□□ -0.13
SNX21-211ENST00000486336 PRPF40BQ6NWY9 871 aaKnown RBP14.27□□□□□ -0.13
SNX21-211ENST00000486336 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
SNX21-211ENST00000486336 HYPKQ9NX55 129 aa14.27□□□□□ -0.13
SNX21-211ENST00000486336 TCIRG1Q13488 830 aa14.26□□□□□ -0.13
SNX21-211ENST00000486336 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
SNX21-211ENST00000486336 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 DLEC1Q9Y238 1755 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
SNX21-211ENST00000486336 NTSR2O95665 410 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 LMNB1P20700 586 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 ALDH1B1P30837 517 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 PLBD2Q8NHP8 589 aa14.25□□□□□ -0.13
SNX21-211ENST00000486336 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
SNX21-211ENST00000486336 COL11A2P13942 1736 aaPredicted RBP14.24□□□□□ -0.13
SNX21-211ENST00000486336 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
SNX21-211ENST00000486336 C1QTNF8P60827 252 aa14.24□□□□□ -0.13
SNX21-211ENST00000486336 CCDC30Q5VVM6 783 aa14.24□□□□□ -0.13
SNX21-211ENST00000486336 RIC3Q7Z5B4 369 aa14.24□□□□□ -0.13
SNX21-211ENST00000486336 NLRP10Q86W26 655 aa14.24□□□□□ -0.13
SNX21-211ENST00000486336 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
SNX21-211ENST00000486336 PHAXQ9H814 394 aaKnown RBP14.24□□□□□ -0.13
SNX21-211ENST00000486336 TRMT112Q9UI30 125 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms