RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PCDHB15Q9Y5E8 787 aa18.43■□□□□ 0.54
POLR2J3-204ENST00000486319 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 FHDC1Q9C0D6 1143 aaPredicted RBP18.42■□□□□ 0.54
POLR2J3-204ENST00000486319 KCNQ3O43525 872 aa18.41■□□□□ 0.54
POLR2J3-204ENST00000486319 RFC4P35249 363 aa18.41■□□□□ 0.54
POLR2J3-204ENST00000486319 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
POLR2J3-204ENST00000486319 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 STARD3NLO95772 234 aa18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 HEG1Q9ULI3 1381 aa18.4■□□□□ 0.54
POLR2J3-204ENST00000486319 ZBTB7BO15156 539 aaPredicted RBP18.39■□□□□ 0.54
POLR2J3-204ENST00000486319 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.54
POLR2J3-204ENST00000486319 SYT17Q9BSW7 474 aa18.39■□□□□ 0.54
POLR2J3-204ENST00000486319 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
POLR2J3-204ENST00000486319 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
POLR2J3-204ENST00000486319 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
POLR2J3-204ENST00000486319 G2E3Q7L622 706 aa18.36■□□□□ 0.53
POLR2J3-204ENST00000486319 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
POLR2J3-204ENST00000486319 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
POLR2J3-204ENST00000486319 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
POLR2J3-204ENST00000486319 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-204ENST00000486319 FLIIQ13045 1269 aa18.35■□□□□ 0.53
POLR2J3-204ENST00000486319 TJP1Q07157 1748 aa18.35■□□□□ 0.53
POLR2J3-204ENST00000486319 GYS1P13807 737 aa18.34■□□□□ 0.53
POLR2J3-204ENST00000486319 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-204ENST00000486319 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 ZPR1O75312 459 aa18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 NECTIN2Q92692 538 aa18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 RBM19Q9Y4C8 960 aaKnown RBP18.33■□□□□ 0.53
POLR2J3-204ENST00000486319 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 MMP10P09238 476 aa18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
POLR2J3-204ENST00000486319 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-204ENST00000486319 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
POLR2J3-204ENST00000486319 A1BGP04217 495 aa18.32■□□□□ 0.52
POLR2J3-204ENST00000486319 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-204ENST00000486319 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-204ENST00000486319 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
POLR2J3-204ENST00000486319 COL24A1Q17RW2 1714 aa18.3■□□□□ 0.52
POLR2J3-204ENST00000486319 COL15A1P39059 1388 aa18.3■□□□□ 0.52
POLR2J3-204ENST00000486319 ZNF330Q9Y3S2 320 aaPredicted RBP18.3■□□□□ 0.52
POLR2J3-204ENST00000486319 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
POLR2J3-204ENST00000486319 A0A087WZG4 1122 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 CD2APQ9Y5K6 639 aa18.29■□□□□ 0.52
POLR2J3-204ENST00000486319 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 F6X3S4 739 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 RGS3P49796 1198 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 PARP3Q9Y6F1 533 aa18.28■□□□□ 0.52
POLR2J3-204ENST00000486319 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.51
POLR2J3-204ENST00000486319 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.51
POLR2J3-204ENST00000486319 UTRNP46939 3433 aa18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
POLR2J3-204ENST00000486319 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
POLR2J3-204ENST00000486319 PDE4AP27815 886 aa18.24■□□□□ 0.51
POLR2J3-204ENST00000486319 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
POLR2J3-204ENST00000486319 GNAI3P08754 354 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 TM4SF1P30408 202 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 GPR162Q16538 588 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 MEIS3Q99687 375 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 BACH2Q9BYV9 841 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
POLR2J3-204ENST00000486319 C4AP0C0L4 1744 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 DDR1Q08345 913 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 NFIXQ14938 502 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 SIRT2Q8IXJ6 389 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
POLR2J3-204ENST00000486319 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
POLR2J3-204ENST00000486319 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms