RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ANKRD31Q8N7Z5 1873 aa29.63■■■□□ 2.33
SREBF1-214ENST00000486311 EIF4A1P60842 406 aaKnown RBP29.62■■■□□ 2.33
SREBF1-214ENST00000486311 RBM46Q8TBY0 533 aaKnown RBP29.62■■■□□ 2.33
SREBF1-214ENST00000486311 C21orf2O43822 256 aa29.61■■■□□ 2.33
SREBF1-214ENST00000486311 SRGNP10124 158 aa29.61■■■□□ 2.33
SREBF1-214ENST00000486311 STYK1Q6J9G0 422 aa29.61■■■□□ 2.33
SREBF1-214ENST00000486311 CNKSR1Q969H4 720 aa29.61■■■□□ 2.33
SREBF1-214ENST00000486311 C16orf71Q8IYS4 520 aaPredicted RBP29.6■■■□□ 2.33
SREBF1-214ENST00000486311 MASTLQ96GX5 879 aa29.59■■■□□ 2.33
SREBF1-214ENST00000486311 RRAGCQ9HB90 399 aa29.59■■■□□ 2.33
SREBF1-214ENST00000486311 NIP7Q9Y221 180 aaKnown RBP eCLIP29.59■■■□□ 2.33
SREBF1-214ENST00000486311 COL11A2P13942 1736 aaPredicted RBP29.57■■■□□ 2.32
SREBF1-214ENST00000486311 APLP1P51693 650 aa29.57■■■□□ 2.32
SREBF1-214ENST00000486311 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
SREBF1-214ENST00000486311 HLFQ16534 295 aa29.57■■■□□ 2.32
SREBF1-214ENST00000486311 IFFO2Q5TF58 517 aa29.57■■■□□ 2.32
SREBF1-214ENST00000486311 TPTE2Q6XPS3 522 aa29.57■■■□□ 2.32
SREBF1-214ENST00000486311 ZNF219Q9P2Y4 722 aaPredicted RBP29.57■■■□□ 2.32
SREBF1-214ENST00000486311 GLTPD2A6NH11 291 aa29.56■■■□□ 2.32
SREBF1-214ENST00000486311 KDM3BQ7LBC6 1761 aa29.56■■■□□ 2.32
SREBF1-214ENST00000486311 KLRG2A4D1S0 409 aaPredicted RBP29.55■■■□□ 2.32
SREBF1-214ENST00000486311 PRPF40BQ6NWY9 871 aaKnown RBP29.55■■■□□ 2.32
SREBF1-214ENST00000486311 DLG5Q8TDM6 1919 aa29.55■■■□□ 2.32
SREBF1-214ENST00000486311 RIPK4P57078 832 aa29.54■■■□□ 2.32
SREBF1-214ENST00000486311 FSTL1Q12841 308 aa29.54■■■□□ 2.32
SREBF1-214ENST00000486311 MYBBP1AQ9BQG0 1328 aaKnown RBP29.53■■■□□ 2.32
SREBF1-214ENST00000486311 LTBP3Q9NS15 1303 aa29.53■■■□□ 2.32
SREBF1-214ENST00000486311 ERVV-1B6SEH8 477 aa29.53■■■□□ 2.32
SREBF1-214ENST00000486311 SOGA3Q5TF21 947 aa29.53■■■□□ 2.32
SREBF1-214ENST00000486311 LAMB4A4D0S4 1761 aa29.53■■■□□ 2.32
SREBF1-214ENST00000486311 NGEFQ8N5V2 710 aa29.52■■■□□ 2.32
SREBF1-214ENST00000486311 TAOK3Q9H2K8 898 aa29.52■■■□□ 2.32
SREBF1-214ENST00000486311 RRP7AQ9Y3A4 280 aaKnown RBP29.52■■■□□ 2.32
SREBF1-214ENST00000486311 NPR1P16066 1061 aa29.51■■■□□ 2.31
SREBF1-214ENST00000486311 TSPYL4Q9UJ04 414 aa29.51■■■□□ 2.31
SREBF1-214ENST00000486311 MAP3K15Q6ZN16 1313 aa29.5■■■□□ 2.31
SREBF1-214ENST00000486311 FAM177BA6PVY3 158 aa29.5■■■□□ 2.31
SREBF1-214ENST00000486311 TMPOP42166 694 aaKnown RBP29.5■■■□□ 2.31
SREBF1-214ENST00000486311 C7orf43Q8WVR3 580 aa29.5■■■□□ 2.31
SREBF1-214ENST00000486311 BABAM1Q9NWV8 329 aa29.5■■■□□ 2.31
SREBF1-214ENST00000486311 TNRC6CQ9HCJ0 1690 aaKnown RBP29.5■■■□□ 2.31
SREBF1-214ENST00000486311 ERBB4Q15303 1308 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 CCDC88AQ3V6T2 1871 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 VEGFAP15692 232 aaPredicted RBP29.49■■■□□ 2.31
SREBF1-214ENST00000486311 LMOD3Q0VAK6 560 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 ERFEQ4G0M1 354 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 KIF6Q6ZMV9 814 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 TTLL7Q6ZT98 887 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 DNAJC5GQ8N7S2 189 aa29.49■■■□□ 2.31
SREBF1-214ENST00000486311 MYL6BP14649 208 aa29.48■■■□□ 2.31
SREBF1-214ENST00000486311 WDR90Q96KV7 1748 aa29.48■■■□□ 2.31
SREBF1-214ENST00000486311 GTF2E1P29083 439 aaPredicted RBP29.46■■■□□ 2.31
SREBF1-214ENST00000486311 DPY19L2Q6NUT2 758 aa29.46■■■□□ 2.31
SREBF1-214ENST00000486311 SMC1BQ8NDV3 1235 aa29.46■■■□□ 2.31
SREBF1-214ENST00000486311 NYXQ9GZU5 481 aa29.46■■■□□ 2.31
SREBF1-214ENST00000486311 SLX4Q8IY92 1834 aa29.45■■■□□ 2.31
SREBF1-214ENST00000486311 CCDC93Q567U6 631 aa29.44■■■□□ 2.3
SREBF1-214ENST00000486311 TIAM2Q8IVF5 1701 aa29.44■■■□□ 2.3
SREBF1-214ENST00000486311 FER1L6Q2WGJ9 1857 aa29.44■■■□□ 2.3
SREBF1-214ENST00000486311 ZBTB3Q9H5J0 574 aa29.43■■■□□ 2.3
SREBF1-214ENST00000486311 ABCC12Q96J65 1359 aa29.42■■■□□ 2.3
SREBF1-214ENST00000486311 IBTKQ9P2D0 1353 aaPredicted RBP29.42■■■□□ 2.3
SREBF1-214ENST00000486311 POTECB2RU33 542 aa29.42■■■□□ 2.3
SREBF1-214ENST00000486311 LRP10Q7Z4F1 713 aa29.42■■■□□ 2.3
SREBF1-214ENST00000486311 CCDC146Q8IYE0 955 aa29.42■■■□□ 2.3
SREBF1-214ENST00000486311 ALDH1B1P30837 517 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 PDIA6Q15084 440 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 CRY2Q49AN0 593 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 NUTM1Q86Y26 1132 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 ARFGEF2Q9Y6D5 1785 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 UBN2Q6ZU65 1347 aa29.41■■■□□ 2.3
SREBF1-214ENST00000486311 EIF2S2P20042 333 aaKnown RBP29.4■■■□□ 2.3
SREBF1-214ENST00000486311 GPTP24298 496 aa29.4■■■□□ 2.3
SREBF1-214ENST00000486311 GIGYF2Q6Y7W6 1299 aaKnown RBP29.4■■■□□ 2.3
SREBF1-214ENST00000486311 ZNF34Q8IZ26 560 aa29.4■■■□□ 2.3
SREBF1-214ENST00000486311 RUNDC1Q96C34 613 aa29.4■■■□□ 2.3
SREBF1-214ENST00000486311 FKBP4Q02790 459 aaKnown RBP eCLIP29.39■■■□□ 2.3
SREBF1-214ENST00000486311 WDR43Q15061 677 aaKnown RBP eCLIP29.39■■■□□ 2.3
SREBF1-214ENST00000486311 NEUROD2Q15784 382 aa29.38■■■□□ 2.29
SREBF1-214ENST00000486311 SUSD4Q5VX71 490 aa29.38■■■□□ 2.29
SREBF1-214ENST00000486311 RTKN2Q8IZC4 609 aa29.38■■■□□ 2.29
SREBF1-214ENST00000486311 RIC1Q4ADV7 1423 aa29.37■■■□□ 2.29
SREBF1-214ENST00000486311 OLFM4Q6UX06 510 aa29.37■■■□□ 2.29
SREBF1-214ENST00000486311 CHL1O00533 1208 aa29.36■■■□□ 2.29
SREBF1-214ENST00000486311 HTRA3P83110 453 aa29.36■■■□□ 2.29
SREBF1-214ENST00000486311 PROSER3Q2NL68 480 aa29.36■■■□□ 2.29
SREBF1-214ENST00000486311 ADAMTS8Q9UP79 889 aa29.36■■■□□ 2.29
SREBF1-214ENST00000486311 TRIM35Q9UPQ4 493 aa29.36■■■□□ 2.29
SREBF1-214ENST00000486311 NTSR2O95665 410 aa29.35■■■□□ 2.29
SREBF1-214ENST00000486311 DICER1Q9UPY3 1922 aaKnown RBP29.35■■■□□ 2.29
SREBF1-214ENST00000486311 DDNO94850 711 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-214ENST00000486311 HOXA10P31260 410 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-214ENST00000486311 PARP10Q53GL7 1025 aa29.34■■■□□ 2.29
SREBF1-214ENST00000486311 PRKRIP1Q9H875 184 aaPredicted RBP29.34■■■□□ 2.29
SREBF1-214ENST00000486311 ANXA1P04083 346 aa29.33■■■□□ 2.29
SREBF1-214ENST00000486311 ZNF277Q9NRM2 450 aaPredicted RBP29.33■■■□□ 2.29
SREBF1-214ENST00000486311 CACNA1SQ13698 1873 aa29.32■■■□□ 2.28
SREBF1-214ENST00000486311 NUP98P52948 1817 aa29.32■■■□□ 2.28
SREBF1-214ENST00000486311 PPP1R42Q7Z4L9 355 aa29.32■■■□□ 2.28
SREBF1-214ENST00000486311 RPGRQ92834 1020 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms