RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
DCLK1-207ENST00000486239 NBPF10Q6P3W6 841 aaKnown RBP17.86■□□□□ 0.45
DCLK1-207ENST00000486239 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
DCLK1-207ENST00000486239 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
DCLK1-207ENST00000486239 NBPF15Q8N660 670 aa17.86■□□□□ 0.45
DCLK1-207ENST00000486239 NUP98P52948 1817 aa17.86■□□□□ 0.45
DCLK1-207ENST00000486239 STYK1Q6J9G0 422 aa17.85■□□□□ 0.45
DCLK1-207ENST00000486239 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
DCLK1-207ENST00000486239 CNKSR1Q969H4 720 aa17.85■□□□□ 0.45
DCLK1-207ENST00000486239 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
DCLK1-207ENST00000486239 TNRC6CQ9HCJ0 1690 aaKnown RBP17.85■□□□□ 0.45
DCLK1-207ENST00000486239 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
DCLK1-207ENST00000486239 C9orf131Q5VYM1 1079 aa17.84■□□□□ 0.45
DCLK1-207ENST00000486239 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
DCLK1-207ENST00000486239 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
DCLK1-207ENST00000486239 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
DCLK1-207ENST00000486239 MAP3K15Q6ZN16 1313 aa17.83■□□□□ 0.44
DCLK1-207ENST00000486239 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
DCLK1-207ENST00000486239 MASTLQ96GX5 879 aa17.83■□□□□ 0.44
DCLK1-207ENST00000486239 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
DCLK1-207ENST00000486239 TIAM2Q8IVF5 1701 aa17.82■□□□□ 0.44
DCLK1-207ENST00000486239 LMNB1P20700 586 aa17.82■□□□□ 0.44
DCLK1-207ENST00000486239 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
DCLK1-207ENST00000486239 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.44
DCLK1-207ENST00000486239 CACNA1SQ13698 1873 aa17.82■□□□□ 0.44
DCLK1-207ENST00000486239 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
DCLK1-207ENST00000486239 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
DCLK1-207ENST00000486239 DICER1Q9UPY3 1922 aaKnown RBP17.81■□□□□ 0.44
DCLK1-207ENST00000486239 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
DCLK1-207ENST00000486239 HOXB7P09629 217 aa17.81■□□□□ 0.44
DCLK1-207ENST00000486239 SRGNP10124 158 aa17.81■□□□□ 0.44
DCLK1-207ENST00000486239 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
DCLK1-207ENST00000486239 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
DCLK1-207ENST00000486239 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
DCLK1-207ENST00000486239 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
DCLK1-207ENST00000486239 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
DCLK1-207ENST00000486239 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
DCLK1-207ENST00000486239 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
DCLK1-207ENST00000486239 NPR1P16066 1061 aa17.79■□□□□ 0.44
DCLK1-207ENST00000486239 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
DCLK1-207ENST00000486239 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
DCLK1-207ENST00000486239 CHL1O00533 1208 aa17.78■□□□□ 0.44
DCLK1-207ENST00000486239 KIF3CO14782 793 aa17.78■□□□□ 0.44
DCLK1-207ENST00000486239 MYL6BP14649 208 aa17.78■□□□□ 0.44
DCLK1-207ENST00000486239 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
DCLK1-207ENST00000486239 TOMM70O94826 608 aa17.77■□□□□ 0.44
DCLK1-207ENST00000486239 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
DCLK1-207ENST00000486239 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
DCLK1-207ENST00000486239 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
DCLK1-207ENST00000486239 CHMP4AQ9BY43 222 aa17.77■□□□□ 0.44
DCLK1-207ENST00000486239 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
DCLK1-207ENST00000486239 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
DCLK1-207ENST00000486239 HLFQ16534 295 aa17.76■□□□□ 0.43
DCLK1-207ENST00000486239 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
DCLK1-207ENST00000486239 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
DCLK1-207ENST00000486239 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
DCLK1-207ENST00000486239 TAOK3Q9H2K8 898 aa17.76■□□□□ 0.43
DCLK1-207ENST00000486239 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
DCLK1-207ENST00000486239 NFKBIEO00221 500 aa17.75■□□□□ 0.43
DCLK1-207ENST00000486239 C21orf2O43822 256 aa17.75■□□□□ 0.43
DCLK1-207ENST00000486239 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
DCLK1-207ENST00000486239 RASSF7Q02833 373 aa17.75■□□□□ 0.43
DCLK1-207ENST00000486239 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
DCLK1-207ENST00000486239 NGEFQ8N5V2 710 aa17.75■□□□□ 0.43
DCLK1-207ENST00000486239 GRIPAP1Q4V328 841 aa17.74■□□□□ 0.43
DCLK1-207ENST00000486239 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
DCLK1-207ENST00000486239 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
DCLK1-207ENST00000486239 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
DCLK1-207ENST00000486239 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
DCLK1-207ENST00000486239 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
DCLK1-207ENST00000486239 HSPA6P17066 643 aa17.73■□□□□ 0.43
DCLK1-207ENST00000486239 CRY2Q49AN0 593 aa17.73■□□□□ 0.43
DCLK1-207ENST00000486239 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
DCLK1-207ENST00000486239 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
DCLK1-207ENST00000486239 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
DCLK1-207ENST00000486239 GLTPD2A6NH11 291 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 GNAI1P63096 354 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 PDIA6Q15084 440 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 RTKN2Q8IZC4 609 aa17.72■□□□□ 0.43
DCLK1-207ENST00000486239 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
DCLK1-207ENST00000486239 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
DCLK1-207ENST00000486239 FSTL1Q12841 308 aa17.71■□□□□ 0.43
DCLK1-207ENST00000486239 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
DCLK1-207ENST00000486239 NMRK2Q9NPI5 230 aa17.71■□□□□ 0.43
DCLK1-207ENST00000486239 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
DCLK1-207ENST00000486239 WDR90Q96KV7 1748 aa17.71■□□□□ 0.43
DCLK1-207ENST00000486239 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.42
DCLK1-207ENST00000486239 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
DCLK1-207ENST00000486239 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
DCLK1-207ENST00000486239 APAF1O14727 1248 aa17.7■□□□□ 0.42
DCLK1-207ENST00000486239 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
DCLK1-207ENST00000486239 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
DCLK1-207ENST00000486239 CEP350Q5VT06 3117 aa17.69■□□□□ 0.42
DCLK1-207ENST00000486239 ANP32CO43423 234 aa17.69■□□□□ 0.42
DCLK1-207ENST00000486239 NTSR2O95665 410 aa17.69■□□□□ 0.42
DCLK1-207ENST00000486239 GPTP24298 496 aa17.69■□□□□ 0.42
DCLK1-207ENST00000486239 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms